RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PDCD2LQ9BRP1 358 aa16.29■□□□□ 0.2
SF3B2-215ENST00000534307 POLR3EQ9NVU0 708 aa16.29■□□□□ 0.2
SF3B2-215ENST00000534307 TRANK1O15050 2925 aa16.29■□□□□ 0.2
SF3B2-215ENST00000534307 FRMPD4Q14CM0 1322 aa16.28■□□□□ 0.2
SF3B2-215ENST00000534307 TLR3O15455 904 aaKnown RBP16.28■□□□□ 0.2
SF3B2-215ENST00000534307 B4GALT4O60513 344 aa16.28■□□□□ 0.2
SF3B2-215ENST00000534307 EIF3JO75822 258 aaKnown RBP16.28■□□□□ 0.2
SF3B2-215ENST00000534307 RGS20O76081 388 aa16.28■□□□□ 0.2
SF3B2-215ENST00000534307 ARHGAP1Q07960 439 aa16.28■□□□□ 0.2
SF3B2-215ENST00000534307 RASEFQ8IZ41 740 aa16.28■□□□□ 0.2
SF3B2-215ENST00000534307 SRBD1Q8N5C6 995 aaKnown RBP16.28■□□□□ 0.2
SF3B2-215ENST00000534307 MTG1Q9BT17 334 aaPredicted RBP16.28■□□□□ 0.2
SF3B2-215ENST00000534307 LRRC2Q9BYS8 371 aa16.28■□□□□ 0.2
SF3B2-215ENST00000534307 ALDH8A1Q9H2A2 487 aaPredicted RBP16.28■□□□□ 0.2
SF3B2-215ENST00000534307 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
SF3B2-215ENST00000534307 TMEM265A0A087WTH1 108 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 CCDC69A6NI79 296 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 PLEKHA8P1O95397 391 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 EXOSC10Q01780 885 aaKnown RBP16.27■□□□□ 0.2
SF3B2-215ENST00000534307 LY6KQ17RY6 165 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 ADCK5Q3MIX3 580 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 RNF20Q5VTR2 975 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 SEPT14Q6ZU15 432 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 VSIG10LQ86VR7 867 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 IL31RAQ8NI17 732 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 KCNB2Q92953 911 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 EMID1Q96A84 441 aaPredicted RBP16.27■□□□□ 0.2
SF3B2-215ENST00000534307 LZTS2Q9BRK4 669 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 TRPV6Q9H1D0 765 aa16.27■□□□□ 0.2
SF3B2-215ENST00000534307 TCF20Q9UGU0 1960 aaKnown RBP16.27■□□□□ 0.19
SF3B2-215ENST00000534307 GCOM1H8Y6P7 765 aaPredicted RBP16.26■□□□□ 0.19
SF3B2-215ENST00000534307 KPNA6O60684 536 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 MMP3P08254 477 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 MYL3P08590 195 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 POLR2MP0CAP2 368 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 CALM1P0DP23 149 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 CALM2P0DP24 149 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 CALM3P0DP25 149 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 RXRAP19793 462 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 GNAQP50148 359 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 PGM5Q15124 567 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 BRDTQ58F21 947 aaPredicted RBP16.26■□□□□ 0.19
SF3B2-215ENST00000534307 NFXL1Q6ZNB6 911 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 C16orf59Q7L2K0 433 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 AFG1LQ8WV93 481 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 NEK1Q96PY6 1258 aa16.26■□□□□ 0.19
SF3B2-215ENST00000534307 NOC4LQ9BVI4 516 aaKnown RBP16.26■□□□□ 0.19
SF3B2-215ENST00000534307 UMODL1Q5DID0 1318 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 GH1P01241 217 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 CSF2RAP15509 400 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 CYP2C18P33260 490 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 GRIN2CQ14957 1233 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 CMTR1Q8N1G2 835 aaKnown RBP16.25■□□□□ 0.19
SF3B2-215ENST00000534307 FANCBQ8NB91 859 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 PIBF1Q8WXW3 757 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 RRP36Q96EU6 259 aaKnown RBP16.25■□□□□ 0.19
SF3B2-215ENST00000534307 PPP1R12CQ9BZL4 782 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 HIPK3Q9H422 1215 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 SLC12A7Q9Y666 1083 aa16.25■□□□□ 0.19
SF3B2-215ENST00000534307 PIK3CDO00329 1044 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 PLA2G5P39877 138 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 PPIGQ13427 754 aaKnown RBP eCLIP16.24■□□□□ 0.19
SF3B2-215ENST00000534307 NBPF20Q3BBV1 942 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 RASIP1Q5U651 963 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 NFRKBQ6P4R8 1299 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 APOA5Q6Q788 366 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 TMTC3Q6ZXV5 915 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 DHX32Q7L7V1 743 aaKnown RBP16.24■□□□□ 0.19
SF3B2-215ENST00000534307 FCHSD1Q86WN1 690 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 RAB11FIP4Q86YS3 637 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 TMEM199Q8N511 208 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 RNPC3Q96LT9 517 aaKnown RBP16.24■□□□□ 0.19
SF3B2-215ENST00000534307 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.24■□□□□ 0.19
SF3B2-215ENST00000534307 TRMT13Q9NUP7 481 aaKnown RBP16.24■□□□□ 0.19
SF3B2-215ENST00000534307 MRVI1Q9Y6F6 885 aa16.24■□□□□ 0.19
SF3B2-215ENST00000534307 MEIS2O14770 477 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 MYCLP12524 364 aaPredicted RBP16.23■□□□□ 0.19
SF3B2-215ENST00000534307 HOXD8P13378 290 aaPredicted RBP16.23■□□□□ 0.19
SF3B2-215ENST00000534307 CCND2P30279 289 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 KRT32Q14532 448 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 TMEM240Q5SV17 173 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 MICU3Q86XE3 530 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 PPTC7Q8NI37 304 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 KAT2BQ92831 832 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 VWCEQ96DN2 955 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 TCEANC2Q96MN5 208 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 WNT8AQ9H1J5 351 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
SF3B2-215ENST00000534307 BRPF3Q9ULD4 1205 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 MYH7BA7E2Y1 1941 aa16.23■□□□□ 0.19
SF3B2-215ENST00000534307 SUPT20HL2P0C7V6 817 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 TGFB3P10600 412 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 HSPA4P34932 840 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 MRPS9P82933 396 aaKnown RBP16.22■□□□□ 0.19
SF3B2-215ENST00000534307 SP2Q02086 613 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 PTPN11Q06124 597 aaPredicted RBP16.22■□□□□ 0.19
SF3B2-215ENST00000534307 FUT2Q10981 343 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 LAMC2Q13753 1193 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 MYSM1Q5VVJ2 828 aa16.22■□□□□ 0.19
SF3B2-215ENST00000534307 KCNV1Q6PIU1 500 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms