RNA–Protein interactions for RNA: ENST00000534189.1

CCDC180-213, Transcript of coiled-coil domain containing 180, humanhuman

TSL 3

Gene CCDC180, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-213ENST00000534189 SMARCA1P28370 1054 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 PBX2P40425 430 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 CPT1AP50416 773 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 HSD17B4P51659 736 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 TTLL4Q14679 1199 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 STXBP2Q15833 593 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 RASIP1Q5U651 963 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 OR6J1Q8NGC5 347 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 EPHX3Q9H6B9 360 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 GPHNQ9NQX3 736 aaPredicted RBP18.84■□□□□ 0.61
CCDC180-213ENST00000534189 POLR3EQ9NVU0 708 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 COL20A1Q9P218 1284 aa18.84■□□□□ 0.61
CCDC180-213ENST00000534189 CYTH3O43739 400 aa18.83■□□□□ 0.6
CCDC180-213ENST00000534189 PTGS1P23219 599 aa18.83■□□□□ 0.6
CCDC180-213ENST00000534189 GHRHRQ02643 423 aa18.83■□□□□ 0.6
CCDC180-213ENST00000534189 SLC35G1Q2M3R5 365 aa18.83■□□□□ 0.6
CCDC180-213ENST00000534189 NEK1Q96PY6 1258 aa18.83■□□□□ 0.6
CCDC180-213ENST00000534189 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.83■□□□□ 0.6
CCDC180-213ENST00000534189 GCOM1H8Y6P7 765 aaPredicted RBP18.82■□□□□ 0.6
CCDC180-213ENST00000534189 POLR2MP0CAP2 368 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 ITGA7Q13683 1181 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 KRT32Q14532 448 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 SYNE3Q6ZMZ3 975 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 SEPT14Q6ZU15 432 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 RRP36Q96EU6 259 aaKnown RBP18.82■□□□□ 0.6
CCDC180-213ENST00000534189 MYL10Q9BUA6 226 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 SPZ1Q9BXG8 430 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 PXMP2Q9NR77 195 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 SLC12A7Q9Y666 1083 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 REV3LO60673 3130 aa18.82■□□□□ 0.6
CCDC180-213ENST00000534189 TCF20Q9UGU0 1960 aaKnown RBP18.81■□□□□ 0.6
CCDC180-213ENST00000534189 MYO9BQ13459 2157 aa18.81■□□□□ 0.6
CCDC180-213ENST00000534189 GRXCR1A8MXD5 290 aa18.81■□□□□ 0.6
CCDC180-213ENST00000534189 OPLAHO14841 1288 aa18.81■□□□□ 0.6
CCDC180-213ENST00000534189 KPNA6O60684 536 aa18.81■□□□□ 0.6
CCDC180-213ENST00000534189 EIF3JO75822 258 aaKnown RBP18.81■□□□□ 0.6
CCDC180-213ENST00000534189 NR3C2P08235 984 aa18.81■□□□□ 0.6
CCDC180-213ENST00000534189 EIF2AK2P19525 551 aaKnown RBP18.81■□□□□ 0.6
CCDC180-213ENST00000534189 C16orf59Q7L2K0 433 aa18.81■□□□□ 0.6
CCDC180-213ENST00000534189 ALYREFQ86V81 257 aaKnown RBP18.81■□□□□ 0.6
CCDC180-213ENST00000534189 FAM126BQ8IXS8 530 aa18.81■□□□□ 0.6
CCDC180-213ENST00000534189 SLC43A3Q8NBI5 491 aa18.81■□□□□ 0.6
CCDC180-213ENST00000534189 SEC63Q9UGP8 760 aaKnown RBP18.81■□□□□ 0.6
CCDC180-213ENST00000534189 TBX21Q9UL17 535 aa18.81■□□□□ 0.6
CCDC180-213ENST00000534189 TIMP1P01033 207 aa18.8■□□□□ 0.6
CCDC180-213ENST00000534189 MYL3P08590 195 aa18.8■□□□□ 0.6
CCDC180-213ENST00000534189 TSGA10IPQ3SY00 556 aa18.8■□□□□ 0.6
CCDC180-213ENST00000534189 TMEM31Q5JXX7 168 aa18.8■□□□□ 0.6
CCDC180-213ENST00000534189 PIBF1Q8WXW3 757 aa18.8■□□□□ 0.6
CCDC180-213ENST00000534189 SNX27Q96L92 541 aa18.8■□□□□ 0.6
CCDC180-213ENST00000534189 MTG1Q9BT17 334 aaPredicted RBP18.8■□□□□ 0.6
CCDC180-213ENST00000534189 LRRC2Q9BYS8 371 aa18.8■□□□□ 0.6
CCDC180-213ENST00000534189 CHD7Q9P2D1 2997 aa18.8■□□□□ 0.6
CCDC180-213ENST00000534189 A6NJR5 290 aa18.79■□□□□ 0.6
CCDC180-213ENST00000534189 GH1P01241 217 aa18.79■□□□□ 0.6
CCDC180-213ENST00000534189 IGFBP4P22692 258 aa18.79■□□□□ 0.6
CCDC180-213ENST00000534189 HOXA13P31271 388 aaPredicted RBP18.79■□□□□ 0.6
CCDC180-213ENST00000534189 PURAQ00577 322 aaKnown RBP18.79■□□□□ 0.6
CCDC180-213ENST00000534189 TMEM240Q5SV17 173 aa18.79■□□□□ 0.6
CCDC180-213ENST00000534189 CCDC62Q6P9F0 684 aa18.79■□□□□ 0.6
CCDC180-213ENST00000534189 DHX32Q7L7V1 743 aaKnown RBP18.79■□□□□ 0.6
CCDC180-213ENST00000534189 SGMS1Q86VZ5 419 aa18.79■□□□□ 0.6
CCDC180-213ENST00000534189 COPS5Q92905 334 aa18.79■□□□□ 0.6
CCDC180-213ENST00000534189 PDCD2LQ9BRP1 358 aa18.79■□□□□ 0.6
CCDC180-213ENST00000534189 BAZ2BQ9UIF8 2168 aaKnown RBP18.79■□□□□ 0.6
CCDC180-213ENST00000534189 MUC6Q6W4X9 2439 aa18.79■□□□□ 0.6
CCDC180-213ENST00000534189 GRIN2DO15399 1336 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 GPR37L1O60883 481 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 ARIH2O95376 493 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 CD4P01730 458 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 HMGB1P09429 215 aaKnown RBP18.78■□□□□ 0.6
CCDC180-213ENST00000534189 MYCLP12524 364 aaPredicted RBP18.78■□□□□ 0.6
CCDC180-213ENST00000534189 PSMC6P62333 389 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 TFF2Q03403 129 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 FCHSD1Q86WN1 690 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 FANCBQ8NB91 859 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 CUL5Q93034 780 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 TSPYL2Q9H2G4 693 aaPredicted RBP18.78■□□□□ 0.6
CCDC180-213ENST00000534189 C11orf16Q9NQ32 467 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 MRVI1Q9Y6F6 885 aa18.78■□□□□ 0.6
CCDC180-213ENST00000534189 PLEKHA8P1O95397 391 aa18.77■□□□□ 0.6
CCDC180-213ENST00000534189 RXRAP19793 462 aa18.77■□□□□ 0.6
CCDC180-213ENST00000534189 EXOSC10Q01780 885 aaKnown RBP18.77■□□□□ 0.6
CCDC180-213ENST00000534189 COL9A3Q14050 684 aaPredicted RBP18.77■□□□□ 0.6
CCDC180-213ENST00000534189 LY6KQ17RY6 165 aa18.77■□□□□ 0.6
CCDC180-213ENST00000534189 MFSD5Q6N075 450 aa18.77■□□□□ 0.6
CCDC180-213ENST00000534189 KCNV1Q6PIU1 500 aa18.77■□□□□ 0.6
CCDC180-213ENST00000534189 VSIG10LQ86VR7 867 aa18.77■□□□□ 0.6
CCDC180-213ENST00000534189 RASEFQ8IZ41 740 aa18.77■□□□□ 0.6
CCDC180-213ENST00000534189 TMEM199Q8N511 208 aa18.77■□□□□ 0.6
CCDC180-213ENST00000534189 SRBD1Q8N5C6 995 aaKnown RBP18.77■□□□□ 0.6
CCDC180-213ENST00000534189 DDX41Q9UJV9 622 aaKnown RBP18.77■□□□□ 0.6
CCDC180-213ENST00000534189 CCND2P30279 289 aa18.76■□□□□ 0.59
CCDC180-213ENST00000534189 KCNQ1P51787 676 aa18.76■□□□□ 0.59
CCDC180-213ENST00000534189 PPIGQ13427 754 aaKnown RBP eCLIP18.76■□□□□ 0.59
CCDC180-213ENST00000534189 PGM5Q15124 567 aa18.76■□□□□ 0.59
CCDC180-213ENST00000534189 AAK1Q2M2I8 961 aa18.76■□□□□ 0.59
CCDC180-213ENST00000534189 MICU3Q86XE3 530 aa18.76■□□□□ 0.59
CCDC180-213ENST00000534189 PPP1R12CQ9BZL4 782 aa18.76■□□□□ 0.59
CCDC180-213ENST00000534189 REC8O95072 547 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms