RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 U2SURPO15042 1029 aaKnown RBP6.05□□□□□ -1.44
ITGB1-219ENST00000534049 KLF4O43474 513 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 TRIM13O60858 407 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 PPP1R11O60927 126 aaPredicted RBP6.05□□□□□ -1.44
ITGB1-219ENST00000534049 STK10O94804 968 aaKnown RBP6.05□□□□□ -1.44
ITGB1-219ENST00000534049 LIMS1P48059 325 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 CTSWP56202 376 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 HSP90AA2PQ14568 343 aaPredicted RBP6.05□□□□□ -1.44
ITGB1-219ENST00000534049 NBPF6Q5VWK0 638 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 MBLAC2Q68D91 279 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 DPH6Q7L8W6 267 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 ZC3H18Q86VM9 953 aaKnown RBP6.05□□□□□ -1.44
ITGB1-219ENST00000534049 LRRC47Q8N1G4 583 aaKnown RBP6.05□□□□□ -1.44
ITGB1-219ENST00000534049 DPF3Q92784 378 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 TRMT2BQ96GJ1 504 aaKnown RBP6.05□□□□□ -1.44
ITGB1-219ENST00000534049 NBPF4Q96M43 638 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 FBLN5Q9UBX5 448 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 X6R8D5 127 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 NESP48681 1621 aa6.05□□□□□ -1.44
ITGB1-219ENST00000534049 TBX1O43435 398 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 MAFKO60675 156 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 CYP2C8P10632 490 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 ATF2P15336 505 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 PPP2R2AP63151 447 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 HTRA3P83110 453 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 CYP4F3Q08477 520 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 LSAMPQ13449 338 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 RAB33AQ14088 237 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 INF2Q27J81 1249 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 RSPO2Q6UXX9 243 aaPredicted RBP6.04□□□□□ -1.44
ITGB1-219ENST00000534049 ETV3LQ6ZN32 361 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 SAPCD2Q86UD0 394 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 TEX2Q8IWB9 1127 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 KREMEN2Q8NCW0 462 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 FNIP1Q8TF40 1166 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 C8orf37Q96NL8 207 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 BTG4Q9NY30 223 aa6.04□□□□□ -1.44
ITGB1-219ENST00000534049 ERCC6Q03468 1493 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 A0A1W2PQU0 124 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 SH3D21A4FU49 640 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 CAPNS1P04632 268 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 HOXA5P20719 270 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 NAALADL2Q58DX5 795 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 SLC35F1Q5T1Q4 408 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 CEP68Q76N32 757 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 MIB1Q86YT6 1006 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 CCDC103Q8IW40 242 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 CELF2-AS1Q8N7Q2 184 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 TMEM145Q8NBT3 493 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 ARMC5Q96C12 935 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 DDX11Q96FC9 970 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 LGR4Q9BXB1 951 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 GPR27Q9NS67 375 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 RTEL1Q9NZ71 1219 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 ZNF652Q9Y2D9 606 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 NPFFR2Q9Y5X5 522 aa6.03□□□□□ -1.44
ITGB1-219ENST00000534049 FGFR1P11362 822 aa6.02□□□□□ -1.45
ITGB1-219ENST00000534049 BCL6P41182 706 aa6.02□□□□□ -1.45
ITGB1-219ENST00000534049 KCNC1P48547 511 aa6.02□□□□□ -1.45
ITGB1-219ENST00000534049 SMARCC2Q8TAQ2 1214 aa6.02□□□□□ -1.45
ITGB1-219ENST00000534049 C1orf159Q96HA4 380 aa6.02□□□□□ -1.45
ITGB1-219ENST00000534049 ZFYVE21Q9BQ24 234 aa6.02□□□□□ -1.45
ITGB1-219ENST00000534049 AARSD1Q9BTE6 412 aaKnown RBP6.02□□□□□ -1.45
ITGB1-219ENST00000534049 EPB41L1Q9H4G0 881 aa6.02□□□□□ -1.45
ITGB1-219ENST00000534049 RXFP1Q9HBX9 757 aa6.02□□□□□ -1.45
ITGB1-219ENST00000534049 ST7Q9NRC1 585 aa6.02□□□□□ -1.45
ITGB1-219ENST00000534049 FFAR3O14843 346 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 SMARCA5O60264 1052 aaPredicted RBP6.01□□□□□ -1.45
ITGB1-219ENST00000534049 DGKIO75912 1065 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 ATP2B1P20020 1258 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 FPR2P25090 351 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 MC3RP41968 323 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 NFIXQ14938 502 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 VWA3BQ502W6 1294 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 CYP4F22Q6NT55 531 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 LIPIQ6XZB0 460 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 TTLL7Q6ZT98 887 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 FAM126BQ8IXS8 530 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 RCBTB1Q8NDN9 531 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 PHOSPHO1Q8TCT1 267 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 CHAMP1Q96JM3 812 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 YIPF4Q9BSR8 244 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 IER2Q9BTL4 223 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 HIRIP3Q9BW71 556 aaPredicted RBP6.01□□□□□ -1.45
ITGB1-219ENST00000534049 NTMQ9P121 344 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 TMEFF2Q9UIK5 374 aaPredicted RBP6.01□□□□□ -1.45
ITGB1-219ENST00000534049 NUB1Q9Y5A7 615 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 PCDHA2Q9Y5H9 948 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 LAMC3Q9Y6N6 1575 aa6.01□□□□□ -1.45
ITGB1-219ENST00000534049 KRIT1O00522 736 aa6□□□□□ -1.45
ITGB1-219ENST00000534049 HGSO14964 777 aaPredicted RBP6□□□□□ -1.45
ITGB1-219ENST00000534049 SGSM2O43147 1006 aa6□□□□□ -1.45
ITGB1-219ENST00000534049 PLA2G1BP04054 148 aaKnown RBP6□□□□□ -1.45
ITGB1-219ENST00000534049 SLURP1P55000 103 aa6□□□□□ -1.45
ITGB1-219ENST00000534049 SF1Q15637 639 aaKnown RBP6□□□□□ -1.45
ITGB1-219ENST00000534049 PRSS53Q2L4Q9 553 aa6□□□□□ -1.45
ITGB1-219ENST00000534049 EMC4Q5J8M3 183 aa6□□□□□ -1.45
ITGB1-219ENST00000534049 FRMD5Q7Z6J6 570 aa6□□□□□ -1.45
ITGB1-219ENST00000534049 MILR1Q7Z6M3 343 aa6□□□□□ -1.45
ITGB1-219ENST00000534049 NLRP10Q86W26 655 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms