RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 VPS54Q9P1Q0 977 aa15.39■□□□□ 0.05
CMTM1-219ENST00000533953 PCDHA6Q9UN73 950 aa15.39■□□□□ 0.05
CMTM1-219ENST00000533953 PCDHA8Q9Y5H6 950 aa15.39■□□□□ 0.05
CMTM1-219ENST00000533953 H0YGN5 161 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 CAPN2P17655 700 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 CCND2P30279 289 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 RBM25P49756 843 aaKnown RBP15.38■□□□□ 0.05
CMTM1-219ENST00000533953 ADCY7P51828 1080 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 ANKRD1Q15327 319 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 JAKMIP3Q5VZ66 844 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 SLC39A5Q6ZMH5 540 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 C7orf61Q8IZ16 206 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 OR6J1Q8NGC5 347 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 SCFD2Q8WU76 684 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 RNF26Q9BY78 433 aaPredicted RBP15.38■□□□□ 0.05
CMTM1-219ENST00000533953 GJB4Q9NTQ9 266 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 PHF24Q9UPV7 400 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 MYH6P13533 1939 aa15.38■□□□□ 0.05
CMTM1-219ENST00000533953 MKI67P46013 3256 aaKnown RBP15.38■□□□□ 0.05
CMTM1-219ENST00000533953 A0A1W2PQ45 241 aaPredicted RBP15.37■□□□□ 0.05
CMTM1-219ENST00000533953 A0A1W2PQY0 241 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 EVI5O60447 810 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 ASGR1P07306 291 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 SP2Q02086 613 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 ST3GAL1Q11201 340 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 FSCN1Q16658 493 aaKnown RBP15.37■□□□□ 0.05
CMTM1-219ENST00000533953 CXCL17Q6UXB2 119 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 RASGRP4Q8TDF6 673 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 VTI1AQ96AJ9 217 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 SPC25Q9HBM1 224 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 DDX41Q9UJV9 622 aaKnown RBP15.37■□□□□ 0.05
CMTM1-219ENST00000533953 ZMYND8Q9ULU4 1186 aaPredicted RBP15.37■□□□□ 0.05
CMTM1-219ENST00000533953 TELO2Q9Y4R8 837 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 MRVI1Q9Y6F6 885 aa15.37■□□□□ 0.05
CMTM1-219ENST00000533953 TNRC18O15417 2968 aaPredicted RBP15.36■□□□□ 0.05
CMTM1-219ENST00000533953 SYN1P17600 705 aa15.36■□□□□ 0.05
CMTM1-219ENST00000533953 PSMC6P62333 389 aa15.36■□□□□ 0.05
CMTM1-219ENST00000533953 SEMA3FQ13275 785 aa15.36■□□□□ 0.05
CMTM1-219ENST00000533953 TTLL4Q14679 1199 aa15.36■□□□□ 0.05
CMTM1-219ENST00000533953 AFG1LQ8WV93 481 aa15.36■□□□□ 0.05
CMTM1-219ENST00000533953 ATP11BQ9Y2G3 1177 aa15.36■□□□□ 0.05
CMTM1-219ENST00000533953 FRMPD4Q14CM0 1322 aa15.36■□□□□ 0.05
CMTM1-219ENST00000533953 SPDYE3A6NKU9 549 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 JAK2O60674 1132 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 MYL3P08590 195 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 CST5P28325 142 aaPredicted RBP15.35■□□□□ 0.05
CMTM1-219ENST00000533953 FOSBP53539 338 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 RTP1P59025 263 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 ARHGAP1Q07960 439 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 TRIM60Q495X7 471 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 PPP1R18Q6NYC8 613 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 TRIM22Q8IYM9 498 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 CYP2W1Q8TAV3 490 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 UIMC1Q96RL1 719 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 TSEN34Q9BSV6 310 aaKnown RBP15.35■□□□□ 0.05
CMTM1-219ENST00000533953 BACH2Q9BYV9 841 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 PKD2L1Q9P0L9 805 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 KCNJ14Q9UNX9 436 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 Q9Y3F1 56 aa15.35■□□□□ 0.05
CMTM1-219ENST00000533953 LRRC37A2A6NM11 1700 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 hCG_1984214I3L0E3 225 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 CD2BP2O95400 341 aaKnown RBP15.34■□□□□ 0.05
CMTM1-219ENST00000533953 FDPSP14324 419 aaKnown RBP15.34■□□□□ 0.05
CMTM1-219ENST00000533953 ITGB5P18084 799 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 CLK2P49760 499 aaKnown RBP15.34■□□□□ 0.05
CMTM1-219ENST00000533953 NLRP5P59047 1200 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 CHMP4BP1P59074 171 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 NKX3-2P78367 333 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 PCNX4Q63HM2 1172 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 CPLX2Q6PUV4 134 aaKnown RBP15.34■□□□□ 0.05
CMTM1-219ENST00000533953 ZNF713Q8N859 430 aaPredicted RBP15.34■□□□□ 0.05
CMTM1-219ENST00000533953 PCSK9Q8NBP7 692 aaKnown RBP15.34■□□□□ 0.05
CMTM1-219ENST00000533953 GTF3C6Q969F1 213 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 TBC1D32Q96NH3 1257 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 ANO3Q9BYT9 981 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 ZMYND12Q9H0C1 365 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 UPF2Q9HAU5 1272 aaKnown RBP15.34■□□□□ 0.05
CMTM1-219ENST00000533953 C6orf50Q9HD87 102 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 STARD7Q9NQZ5 370 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 ORC3Q9UBD5 711 aaPredicted RBP15.34■□□□□ 0.05
CMTM1-219ENST00000533953 LIMCH1Q9UPQ0 1083 aa15.34■□□□□ 0.05
CMTM1-219ENST00000533953 FRMPD3Q5JV73 1810 aa15.33■□□□□ 0.05
CMTM1-219ENST00000533953 PDE4DIPQ5VU43 2346 aa15.33■□□□□ 0.05
CMTM1-219ENST00000533953 MOXD2PA6NHM9 499 aa15.33■□□□□ 0.04
CMTM1-219ENST00000533953 SPATA31C2B4DYI2 1134 aa15.33■□□□□ 0.04
CMTM1-219ENST00000533953 ATP9AO75110 1047 aa15.33■□□□□ 0.04
CMTM1-219ENST00000533953 DEXIO95424 95 aa15.33■□□□□ 0.04
CMTM1-219ENST00000533953 GGPS1O95749 300 aa15.33■□□□□ 0.04
CMTM1-219ENST00000533953 GH1P01241 217 aa15.33■□□□□ 0.04
CMTM1-219ENST00000533953 UBA1P22314 1058 aaKnown RBP15.33■□□□□ 0.04
CMTM1-219ENST00000533953 TLE2Q04725 743 aa15.33■□□□□ 0.04
CMTM1-219ENST00000533953 CCDC83Q8IWF9 413 aa15.33■□□□□ 0.04
CMTM1-219ENST00000533953 DHX37Q8IY37 1157 aaKnown RBP15.33■□□□□ 0.04
CMTM1-219ENST00000533953 NSUN7Q8NE18 718 aaKnown RBP15.33■□□□□ 0.04
CMTM1-219ENST00000533953 INPP4AQ96PE3 977 aaPredicted RBP15.33■□□□□ 0.04
CMTM1-219ENST00000533953 RBM27Q9P2N5 1060 aaKnown RBP15.33■□□□□ 0.04
CMTM1-219ENST00000533953 GRIN2DO15399 1336 aa15.33■□□□□ 0.04
CMTM1-219ENST00000533953 ESYT2A0FGR8 921 aa15.32■□□□□ 0.04
CMTM1-219ENST00000533953 A6NJR5 290 aa15.32■□□□□ 0.04
CMTM1-219ENST00000533953 RBAK-RBAKDNI3L0D1 243 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms