RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CACNA2D4Q7Z3S7 1137 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 C7orf25Q9BPX7 421 aa21.43■■□□□ 1.02
CAPN1-226ENST00000533820 CDK8P49336 464 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 AMPD3Q01432 767 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 REXO1Q8N1G1 1221 aaKnown RBP21.42■■□□□ 1.02
CAPN1-226ENST00000533820 RETREG2Q8NC44 543 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 CEP95Q96GE4 821 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 ZC3H4Q9UPT8 1303 aaKnown RBP21.42■■□□□ 1.02
CAPN1-226ENST00000533820 MAGEA1P43355 309 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 CACNB1Q02641 598 aaPredicted RBP21.42■■□□□ 1.02
CAPN1-226ENST00000533820 GRB10Q13322 594 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 KCNK18Q7Z418 384 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 AMIGO3Q86WK7 504 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 BAG3O95817 575 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 MYL1P05976 194 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 PRPHP41219 470 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 SPATA4Q8NEY3 305 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 ERGIC2Q96RQ1 377 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 BLOC1S4Q9NUP1 217 aa21.42■■□□□ 1.02
CAPN1-226ENST00000533820 MCM3P25205 808 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 TNNI2P48788 182 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 CALCRLQ16602 461 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 PTPROQ16827 1216 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 CCDC70Q6NSX1 233 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 LRRC47Q8N1G4 583 aaKnown RBP21.41■■□□□ 1.02
CAPN1-226ENST00000533820 DAGLBQ8NCG7 672 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 SH2D4AQ9H788 454 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 PLAGL2Q9UPG8 496 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 CCDC189A1A4V9 331 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 GOLGA6CA6NDK9 693 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 LAD1O00515 517 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 GOLGA6DP0CG33 693 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 BTDP43251 543 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 TRIM58Q8NG06 486 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 AK8Q96MA6 479 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 OSBPL9Q96SU4 736 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 GPCPD1Q9NPB8 672 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 GOLGA6AQ9NYA3 693 aa21.41■■□□□ 1.02
CAPN1-226ENST00000533820 ESYT3A0FGR9 886 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 FAM170AA1A519 330 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 GNA11P29992 359 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 SLC1A4P43007 532 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 GSCP56915 257 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-226ENST00000533820 SNX29Q8TEQ0 813 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 RAD21O60216 631 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 AARSP49588 968 aaKnown RBP eCLIP21.4■■□□□ 1.02
CAPN1-226ENST00000533820 FAM98CQ17RN3 349 aaKnown RBP21.4■■□□□ 1.02
CAPN1-226ENST00000533820 TPTE2Q6XPS3 522 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 NELFCDQ8IXH7 590 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 TEX11Q8IYF3 940 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 VIPAS39Q9H9C1 493 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 SIK3Q9Y2K2 1263 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 ANO9A1A5B4 782 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 TARSL2A2RTX5 802 aaKnown RBP21.4■■□□□ 1.02
CAPN1-226ENST00000533820 MARCH6O60337 910 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 UBE2SQ16763 222 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 LRCH2Q5VUJ6 765 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 GALNT17Q6IS24 598 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 MSL3Q8N5Y2 521 aaKnown RBP21.4■■□□□ 1.02
CAPN1-226ENST00000533820 PPM1EQ8WY54 764 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 LARP4BQ92615 738 aaKnown RBP21.4■■□□□ 1.02
CAPN1-226ENST00000533820 PNMA5Q96PV4 448 aa21.4■■□□□ 1.02
CAPN1-226ENST00000533820 ZSCAN5CA6NGD5 496 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-226ENST00000533820 CENPPQ6IPU0 288 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 RPAINQ86UA6 219 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 ZSCAN29Q8IWY8 852 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-226ENST00000533820 FAM76AQ8TAV0 307 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 MTMR8Q96EF0 704 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 RPGRIP1Q96KN7 1286 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 PURBQ96QR8 312 aaKnown RBP21.39■■□□□ 1.01
CAPN1-226ENST00000533820 CUEDC2Q9H467 287 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 PACSIN2Q9UNF0 486 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-226ENST00000533820 DLEC1Q9Y238 1755 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 MNAT1P51948 309 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 PICALMQ13492 652 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 DDX12PQ92771 950 aa21.39■■□□□ 1.01
CAPN1-226ENST00000533820 SLC10A5Q5PT55 438 aa21.38■■□□□ 1.01
CAPN1-226ENST00000533820 ANKS1AQ92625 1134 aa21.38■■□□□ 1.01
CAPN1-226ENST00000533820 ZHX3Q9H4I2 956 aa21.38■■□□□ 1.01
CAPN1-226ENST00000533820 SCN7AQ01118 1682 aa21.38■■□□□ 1.01
CAPN1-226ENST00000533820 KCTD16Q68DU8 428 aa21.38■■□□□ 1.01
CAPN1-226ENST00000533820 IQCEQ6IPM2 695 aa21.38■■□□□ 1.01
CAPN1-226ENST00000533820 DNAAF5Q86Y56 855 aa21.38■■□□□ 1.01
CAPN1-226ENST00000533820 WDR66Q8TBY9 1149 aa21.38■■□□□ 1.01
CAPN1-226ENST00000533820 TSGA10Q9BZW7 698 aa21.38■■□□□ 1.01
CAPN1-226ENST00000533820 RBM12Q9NTZ6 932 aaKnown RBP21.38■■□□□ 1.01
CAPN1-226ENST00000533820 TRAF5O00463 557 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 KIF1CO43896 1103 aaKnown RBP21.37■■□□□ 1.01
CAPN1-226ENST00000533820 FTCDO95954 541 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 SEMA3FQ13275 785 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 TSEN2Q8NCE0 465 aaKnown RBP21.37■■□□□ 1.01
CAPN1-226ENST00000533820 IFT81Q8WYA0 676 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 ALS2CR12Q96Q35 445 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 FAM184BQ9ULE4 1060 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 TM4SF1P30408 202 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 BIRC2Q13490 618 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 MAN2A1Q16706 1144 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 CCDC40Q4G0X9 1142 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 MMS22LQ6ZRQ5 1243 aa21.37■■□□□ 1.01
CAPN1-226ENST00000533820 MICALL1Q8N3F8 863 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms