RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, human

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD9-208	ENST00000533643	CIITA	P33076	1130 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	TRAPPC10	P48553	1259 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	PRMT2	P55345	433 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	STXBP2	Q15833	593 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	LETM2	Q2VYF4	491 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	ARMCX2	Q7L311	632 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	CYP2W1	Q8TAV3	490 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	MBOAT7	Q96N66	472 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	RTEL1	Q9NZ71	1219 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	NOL7	Q9UMY1	257 aa	Known RBP	13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	UBIAD1	Q9Y5Z9	338 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	SYNGAP1	Q96PV0	1343 aa		13.56	□□□□□ -0.24
COMMD9-208	ENST00000533643	FAM86B1	E9PN63	330 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	MEIS1	O00470	390 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	ADCY3	O60266	1144 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	EIF3J	O75822	258 aa	Known RBP	13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	TDP2	O95551	362 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	FAM86B2	P0C5J1	330 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	ZNF76	P36508	570 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	NBR1	Q14596	966 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	CEP55	Q53EZ4	464 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	RILPL1	Q5EBL4	403 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	TTC38	Q5R3I4	469 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	PPP4R3A	Q6IN85	833 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	MPHOSPH6	Q99547	160 aa	Known RBP	13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	MXRA8	Q9BRK3	442 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	PCDHB6	Q9Y5E3	794 aa		13.55	□□□□□ -0.24
COMMD9-208	ENST00000533643	IGLV3-22	A0A075B6J6	115 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	CCNT1	O60563	726 aa	Known RBP	13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	STAM2	O75886	525 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	RGS20	O76081	388 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	ELN	P15502	786 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	ITGB5	P18084	799 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	CYP2C19	P33261	490 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	ZNF174	Q15697	407 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	MOXD1	Q6UVY6	613 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	NIPA1	Q7RTP0	329 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	TRMT44	Q8IYL2	757 aa	Known RBP	13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	RAET1E	Q8TD07	263 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	TRIB2	Q92519	343 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	LENG9	Q96B70	501 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	INPP4A	Q96PE3	977 aa	Predicted RBP	13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	NAP1L4	Q99733	375 aa	Known RBP	13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	KATNBL1	Q9H079	304 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	PTCH2	Q9Y6C5	1203 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	PLXNA1	Q9UIW2	1896 aa		13.54	□□□□□ -0.24
COMMD9-208	ENST00000533643	SLC37A4	O43826	429 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	AR	P10275	920 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	GCFC2	P16383	781 aa	Known RBP	13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	MCM7	P33993	719 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643		Q4G0T1	1027 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	PRR16	Q569H4	304 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	PRAMEF19	Q5SWL8	479 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	MFSD14C	Q5VZR4	134 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	SEPT14	Q6ZU15	432 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	EEPD1	Q7L9B9	569 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	CTU1	Q7Z7A3	348 aa	Known RBP	13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	PLA2G4D	Q86XP0	818 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	FBXO16	Q8IX29	292 aa	Predicted RBP	13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	C4orf32	Q8N8J7	132 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	PXYLP1	Q8TE99	480 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	CHAMP1	Q96JM3	812 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	WDR11	Q9BZH6	1224 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	FTO	Q9C0B1	505 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	VTA1	Q9NP79	307 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	JADE2	Q9NQC1	790 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	TFIP11	Q9UBB9	837 aa	Known RBP	13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	DDX25	Q9UHL0	483 aa	Known RBP	13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	PTPN22	Q9Y2R2	807 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	ATP6V1D	Q9Y5K8	247 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	CLIC4	Q9Y696	253 aa		13.53	□□□□□ -0.24
COMMD9-208	ENST00000533643	MYH7B	A7E2Y1	1941 aa		13.52	□□□□□ -0.24
COMMD9-208	ENST00000533643	SPATA31C2	B4DYI2	1134 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	DNM1	Q05193	864 aa	Known RBP	13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	TRIM32	Q13049	653 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	SEMA3F	Q13275	785 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	ACVR2B	Q13705	512 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	ANO1	Q5XXA6	986 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	TAPT1	Q6NXT6	567 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	NLRX1	Q86UT6	975 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	TRPV1	Q8NER1	839 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	GPRASP2	Q96D09	838 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	ZNF396	Q96N95	335 aa	Predicted RBP	13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	USP28	Q96RU2	1077 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	ABHD16B	Q9H3Z7	469 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	PDGFC	Q9NRA1	345 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	KCNH7	Q9NS40	1196 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	CNPY2	Q9Y2B0	182 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	CASP8AP2	Q9UKL3	1982 aa		13.52	□□□□□ -0.25
COMMD9-208	ENST00000533643	RBM47	A0AV96	593 aa	Known RBP	13.51	□□□□□ -0.25
COMMD9-208	ENST00000533643	NEMF	O60524	1076 aa		13.51	□□□□□ -0.25
COMMD9-208	ENST00000533643	HMGCR	P04035	888 aa		13.51	□□□□□ -0.25
COMMD9-208	ENST00000533643	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.51	□□□□□ -0.25
COMMD9-208	ENST00000533643	ICAM3	P32942	547 aa		13.51	□□□□□ -0.25
COMMD9-208	ENST00000533643	CEBPZ	Q03701	1054 aa	Known RBP	13.51	□□□□□ -0.25
COMMD9-208	ENST00000533643	CACNB2	Q08289	660 aa	Predicted RBP	13.51	□□□□□ -0.25

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