RNA–Protein interactions for RNA: ENST00000533524.5

SLC43A3-225, Transcript of solute carrier family 43 member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SLC43A3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-225ENST00000533524 CATSPERGQ6ZRH7 1159 aa23.22■■□□□ 1.31
SLC43A3-225ENST00000533524 GTPBP4Q9BZE4 634 aaKnown RBP23.22■■□□□ 1.31
SLC43A3-225ENST00000533524 LRRC27Q9C0I9 530 aa23.22■■□□□ 1.31
SLC43A3-225ENST00000533524 ALAS1P13196 640 aa23.21■■□□□ 1.31
SLC43A3-225ENST00000533524 ZNF658Q5TYW1 1059 aaPredicted RBP23.21■■□□□ 1.31
SLC43A3-225ENST00000533524 LRRC15Q8TF66 581 aa23.21■■□□□ 1.31
SLC43A3-225ENST00000533524 ATG4CQ96DT6 458 aa23.21■■□□□ 1.31
SLC43A3-225ENST00000533524 NT5C3AQ9H0P0 336 aa23.21■■□□□ 1.31
SLC43A3-225ENST00000533524 TPM3P06753 285 aa23.2■■□□□ 1.3
SLC43A3-225ENST00000533524 SV2BQ7L1I2 683 aa23.2■■□□□ 1.3
SLC43A3-225ENST00000533524 CCDC47Q96A33 483 aaKnown RBP23.2■■□□□ 1.3
SLC43A3-225ENST00000533524 CDCA5Q96FF9 252 aa23.2■■□□□ 1.3
SLC43A3-225ENST00000533524 IGLV3-22A0A075B6J6 115 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 MSH4O15457 936 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 BLOC1S4Q9NUP1 217 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 RPTORQ8N122 1335 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 SMCHD1A6NHR9 2005 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 NFIBO00712 420 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 REPS2Q8NFH8 660 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 ERMNQ8TAM6 284 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 RAD54LQ92698 747 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 MAF1Q9H063 256 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 TAF1DQ9H5J8 278 aaPredicted RBP23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 HOXC10Q9NYD6 342 aa23.19■■□□□ 1.3
SLC43A3-225ENST00000533524 PAPPA2Q9BXP8 1791 aa23.18■■□□□ 1.3
SLC43A3-225ENST00000533524 PPP1R3GB7ZBB8 358 aa23.18■■□□□ 1.3
SLC43A3-225ENST00000533524 CCT6AP40227 531 aaKnown RBP23.18■■□□□ 1.3
SLC43A3-225ENST00000533524 HAUS3Q68CZ6 603 aa23.18■■□□□ 1.3
SLC43A3-225ENST00000533524 DLK2Q6UY11 383 aa23.18■■□□□ 1.3
SLC43A3-225ENST00000533524 LARP4BQ92615 738 aaKnown RBP23.18■■□□□ 1.3
SLC43A3-225ENST00000533524 NUDT12Q9BQG2 462 aa23.18■■□□□ 1.3
SLC43A3-225ENST00000533524 TRIM9Q9C026 710 aa23.18■■□□□ 1.3
SLC43A3-225ENST00000533524 ATP2A1O14983 1001 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 KLRC4O43908 158 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 RHOBTB3O94955 611 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 SETQ01105 290 aaPredicted RBP23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 FMR1Q06787 632 aaKnown RBP eCLIP23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 SPIRE1Q08AE8 756 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 CEP55Q53EZ4 464 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 PNMA8AQ86V59 439 aaPredicted RBP23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 ZSCAN30Q86W11 494 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 ANKRD13AQ8IZ07 590 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 GJA10Q969M2 543 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 TRERF1Q96PN7 1200 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 HSD3B7Q9H2F3 369 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 PARP14Q460N5 1801 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 SCN4AP35499 1836 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 ESPNB1AK53 854 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 PPATQ06203 517 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 TKFCQ3LXA3 575 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 KMT5BQ4FZB7 885 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 MUM1L1Q5H9M0 696 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 CNNM4Q6P4Q7 775 aa23.17■■□□□ 1.3
SLC43A3-225ENST00000533524 HOXA7P31268 230 aaPredicted RBP23.16■■□□□ 1.3
SLC43A3-225ENST00000533524 DRC7Q8IY82 874 aa23.16■■□□□ 1.3
SLC43A3-225ENST00000533524 SYTL5Q8TDW5 730 aaPredicted RBP23.16■■□□□ 1.3
SLC43A3-225ENST00000533524 FANCLQ9NW38 375 aa23.16■■□□□ 1.3
SLC43A3-225ENST00000533524 MEIS1O00470 390 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 CD44P16070 742 aaKnown RBP23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 SPATA1Q5VX52 437 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 NIPA1Q7RTP0 329 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 ERO1BQ86YB8 467 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 KCTD17Q8N5Z5 321 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 CYP2W1Q8TAV3 490 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 SLC5A5Q92911 643 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 FRMPD4Q14CM0 1322 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 FANCCQ00597 558 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 MCM6Q14566 821 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 FAM43AQ8N2R8 423 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 MXRA8Q9BRK3 442 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 RNF146Q9NTX7 359 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 COL20A1Q9P218 1284 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 VAV3Q9UKW4 847 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 NFE2L3Q9Y4A8 694 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 RLFQ13129 1914 aa23.15■■□□□ 1.3
SLC43A3-225ENST00000533524 PVALEFA0A1B0GWK0 134 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 CXCL11O14625 94 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 CBFA2T2O43439 604 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 BCRP11274 1271 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 ASIC1P78348 528 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 RNF207Q6ZRF8 634 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 SPC24Q8NBT2 197 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 WNK4Q96J92 1243 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 HOMER2Q9NSB8 354 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 SYNRGQ9UMZ2 1314 aa23.14■■□□□ 1.29
SLC43A3-225ENST00000533524 STAT3P40763 770 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 PPP1R2P41236 205 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 ECM1Q16610 540 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 EAPPQ56P03 285 aaPredicted RBP23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 PCNX4Q63HM2 1172 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 NCAPH2Q6IBW4 605 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 GIMAP8Q8ND71 665 aaPredicted RBP23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 MED15Q96RN5 788 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 EXOC1Q9NV70 894 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 RWDD2AQ9UIY3 292 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 ZNF214Q9UL59 606 aaPredicted RBP23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 ZKSCAN5Q9Y2L8 839 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 WDR90Q96KV7 1748 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 SPDYE5A6NIY4 337 aa23.13■■□□□ 1.29
SLC43A3-225ENST00000533524 ZNF18P17022 549 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms