RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 ESYT2A0FGR8 921 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 KIAA0355O15063 1070 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 MAFGO15525 162 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 ARIH2O95376 493 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 HOXD8P13378 290 aaPredicted RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 CPA1P15085 419 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 IFNAR1P17181 557 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 EIF2AK2P19525 551 aaKnown RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 CCND2P30279 289 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 HOXA13P31271 388 aaPredicted RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 ADD1P35611 737 aaKnown RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 ATN1P54259 1190 aaPredicted RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 IRX5P78411 483 aaPredicted RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 MRPS9P82933 396 aaKnown RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 APOBRQ0VD83 1088 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 PFKFB3Q16875 520 aaPredicted RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 TRIM60Q495X7 471 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 BRDTQ58F21 947 aaPredicted RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 PCNX4Q63HM2 1172 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 CHRDL2Q6WN34 429 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 CUL5Q93034 780 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 FERMT2Q96AC1 680 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 INPP4AQ96PE3 977 aaPredicted RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 RNF26Q9BY78 433 aaPredicted RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 PSTPIP2Q9H939 334 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 BARHL2Q9NY43 387 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
NUP98-220ENST00000533346 GRIN2DO15399 1336 aa11.33□□□□□ -0.6
NUP98-220ENST00000533346 DNAH12Q6ZR08 3092 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 FOSP01100 380 aaPredicted RBP11.32□□□□□ -0.6
NUP98-220ENST00000533346 GH1P01241 217 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 CD4P01730 458 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 CLK2P49760 499 aaKnown RBP11.32□□□□□ -0.6
NUP98-220ENST00000533346 FGD1P98174 961 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 PURAQ00577 322 aaKnown RBP11.32□□□□□ -0.6
NUP98-220ENST00000533346 TLE2Q04725 743 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
NUP98-220ENST00000533346 ARHGAP1Q07960 439 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 FAAP100Q0VG06 881 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 LAMC2Q13753 1193 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 PKN1Q16512 942 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 WWC2Q6AWC2 1192 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 MCTP2Q6DN12 878 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 USP17L6PQ6QN14 398 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 FAM126BQ8IXS8 530 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 OR6J1Q8NGC5 347 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 SMARCC2Q8TAQ2 1214 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 SENP7Q9BQF6 1050 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 RIC8AQ9NPQ8 531 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 PDLIM7Q9NR12 457 aa11.32□□□□□ -0.6
NUP98-220ENST00000533346 LAMA3Q16787 3333 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 SPATA31C2B4DYI2 1134 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 STXBP3O00186 592 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 PPFIA4O75335 1185 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 CLTBP09497 229 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 BEX3Q00994 111 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 AP3B2Q13367 1082 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 ITGA7Q13683 1181 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 GNPTABQ3T906 1256 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 MYSM1Q5VVJ2 828 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 SEPT14Q6ZU15 432 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
NUP98-220ENST00000533346 SESTD1Q86VW0 696 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 FCHSD1Q86WN1 690 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 RAB11FIP4Q86YS3 637 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 CCDC82Q8N4S0 544 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 IL31RAQ8NI17 732 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 MTG1Q9BT17 334 aaPredicted RBP11.31□□□□□ -0.6
NUP98-220ENST00000533346 ZMYND12Q9H0C1 365 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 SH3GLB2Q9NR46 395 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 TBX21Q9UL17 535 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 ATP11BQ9Y2G3 1177 aa11.31□□□□□ -0.6
NUP98-220ENST00000533346 TRIM43BA6NCK2 446 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 DCDC2CA8MYV0 355 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 DLL1O00548 723 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 FIBPO43427 364 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
NUP98-220ENST00000533346 MMP3P08254 477 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 SCG2P13521 617 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 MAGEA10P43363 369 aaPredicted RBP11.3□□□□□ -0.6
NUP98-220ENST00000533346 ANKRD1Q15327 319 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 CELF3Q5SZQ8 465 aaKnown RBP11.3□□□□□ -0.6
NUP98-220ENST00000533346 NFRKBQ6P4R8 1299 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 CXCL17Q6UXB2 119 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 PPTC7Q8NI37 304 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 CCDC12Q8WUD4 166 aaPredicted RBP11.3□□□□□ -0.6
NUP98-220ENST00000533346 CRYGNQ8WXF5 182 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 COPS5Q92905 334 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 TRIM43Q96BQ3 446 aaPredicted RBP11.3□□□□□ -0.6
NUP98-220ENST00000533346 GPRASP2Q96D09 838 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 PDRG1Q9NUG6 133 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 PRKAG2Q9UGJ0 569 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 ZMYND8Q9ULU4 1186 aaPredicted RBP11.3□□□□□ -0.6
NUP98-220ENST00000533346 PCDHA6Q9UN73 950 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 PCDHA8Q9Y5H6 950 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 UBIAD1Q9Y5Z9 338 aa11.3□□□□□ -0.6
NUP98-220ENST00000533346 MRVI1Q9Y6F6 885 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms