RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 IQCF3P0C7M6 154 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 TGFB3P10600 412 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 HOXD8P13378 290 aaPredicted RBP15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 RBL2Q08999 1139 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 DGKDQ16760 1214 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 FAM47CQ5HY64 1035 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 VSIG10LQ86VR7 867 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 RETREG2Q8NC44 543 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 PPTC7Q8NI37 304 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 CAGE1Q8TC20 777 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 PHOSPHO2Q8TCD6 241 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 KAT2BQ92831 832 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 SCLYQ96I15 445 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 GAS2L1Q99501 681 aaPredicted RBP15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 PDCD2LQ9BRP1 358 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 SLC28A3Q9HAS3 691 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 EYSQ5T1H1 3165 aa15.48■□□□□ 0.07
AMBRA1-210ENST00000531542 PNMA6FA0A0J9YX94 578 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 E7EWF7 191 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 PPFIA4O75335 1185 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 PARNO95453 639 aaKnown RBP15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 ACTN1P12814 892 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 EIF2AK2P19525 551 aaKnown RBP15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 SMARCA1P28370 1054 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 SLC35G1Q2M3R5 365 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 RALYLQ86SE5 291 aaKnown RBP15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 CCDC155Q8N6L0 562 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 AFAP1L1Q8TED9 768 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 PRUNE2Q8WUY3 3088 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 CTAGE1Q96RT6 745 aa15.47■□□□□ 0.07
AMBRA1-210ENST00000531542 HAS3O00219 553 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 CYTH3O43739 400 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 RGS20O76081 388 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 F2P00734 622 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 ATP2A2P16615 1042 aaKnown RBP15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 WTAPQ15007 396 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 PTGISQ16647 500 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 IGDCC4Q8TDY8 1250 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 KATNAL1Q9BW62 490 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 GTF2IRD1Q9UHL9 959 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 NOD1Q9Y239 953 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 YBX2Q9Y2T7 364 aaKnown RBP15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 MRVI1Q9Y6F6 885 aa15.46■□□□□ 0.07
AMBRA1-210ENST00000531542 TTC28Q96AY4 2481 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 GCOM1H8Y6P7 765 aaPredicted RBP15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 STAM2O75886 525 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 BAIAP3O94812 1187 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 POLR2MP0CAP2 368 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 PGM5Q15124 567 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 MYSM1Q5VVJ2 828 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 CATIPQ7Z7H3 387 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 DHX37Q8IY37 1157 aaKnown RBP15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 MB21D2Q8IYB1 491 aaPredicted RBP15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 SYMPKQ92797 1274 aaKnown RBP15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 PIGSQ96S52 555 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 SLC9A7Q96T83 725 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 NKX2-4Q9H2Z4 354 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 PRDM12Q9H4Q4 367 aa15.45■□□□□ 0.06
AMBRA1-210ENST00000531542 FRMPD4Q14CM0 1322 aa15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 VCANP13611 3396 aa15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 POU3F3P20264 500 aaPredicted RBP15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 ANTXR2P58335 489 aa15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 CELF3Q5SZQ8 465 aaKnown RBP15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 GDF6Q6KF10 455 aaPredicted RBP15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 DEFB128Q7Z7B8 93 aa15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 TMTC2Q8N394 836 aa15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 SENP2Q9HC62 589 aa15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 TAF6LQ9Y6J9 622 aa15.44■□□□□ 0.06
AMBRA1-210ENST00000531542 ZBBXA8MT70 800 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 DDAH1O94760 285 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 CXCL10P02778 98 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 SELPP16109 830 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 CCND2P30279 289 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 HOXA13P31271 388 aaPredicted RBP15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 ICAM3P32942 547 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 PSEN2P49810 448 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 ADGRE1Q14246 886 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 TMEM67Q5HYA8 995 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 CHST3Q7LGC8 479 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 HOMER1Q86YM7 354 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 C7orf31Q8N865 590 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 USP38Q8NB14 1042 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 ATXN2LQ8WWM7 1075 aaKnown RBP15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 LZTS2Q9BRK4 669 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 SPZ1Q9BXG8 430 aa15.43■□□□□ 0.06
AMBRA1-210ENST00000531542 MYCLP12524 364 aaPredicted RBP15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 KIF5BP33176 963 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 RABGGTBP53611 331 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 PTK7Q13308 1070 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 MFSD10Q14728 455 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 GPNMBQ14956 572 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 KIAA0753Q2KHM9 967 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 PPP2R2DQ66LE6 453 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 XRRA1Q6P2D8 792 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 DHX38Q92620 1227 aaKnown RBP15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 INPP4AQ96PE3 977 aaPredicted RBP15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 LY9Q9HBG7 655 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 CHD7Q9P2D1 2997 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 HDAC6Q9UBN7 1215 aa15.42■□□□□ 0.06
AMBRA1-210ENST00000531542 RBM8AQ9Y5S9 174 aaKnown RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms