RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 OTOP2Q7RTS6 562 aa17.34■□□□□ 0.37
SNHG9-201ENST00000531523 NCOA7Q8NI08 942 aa17.34■□□□□ 0.37
SNHG9-201ENST00000531523 EMID1Q96A84 441 aaPredicted RBP17.34■□□□□ 0.37
SNHG9-201ENST00000531523 PIGSQ96S52 555 aa17.34■□□□□ 0.37
SNHG9-201ENST00000531523 PDCD2LQ9BRP1 358 aa17.34■□□□□ 0.37
SNHG9-201ENST00000531523 LSG1Q9H089 658 aaKnown RBP17.34■□□□□ 0.37
SNHG9-201ENST00000531523 GPHNQ9NQX3 736 aaPredicted RBP17.34■□□□□ 0.37
SNHG9-201ENST00000531523 YBX2Q9Y2T7 364 aaKnown RBP17.34■□□□□ 0.37
SNHG9-201ENST00000531523 PCDHA1Q9Y5I3 950 aa17.34■□□□□ 0.37
SNHG9-201ENST00000531523 FRMPD4Q14CM0 1322 aa17.33■□□□□ 0.36
SNHG9-201ENST00000531523 GH1P01241 217 aa17.33■□□□□ 0.36
SNHG9-201ENST00000531523 SUPT20HL2P0C7V6 817 aa17.33■□□□□ 0.36
SNHG9-201ENST00000531523 HOXA13P31271 388 aaPredicted RBP17.33■□□□□ 0.36
SNHG9-201ENST00000531523 PTPN11Q06124 597 aaPredicted RBP17.33■□□□□ 0.36
SNHG9-201ENST00000531523 WTAPQ15007 396 aa17.33■□□□□ 0.36
SNHG9-201ENST00000531523 SESTD1Q86VW0 696 aa17.33■□□□□ 0.36
SNHG9-201ENST00000531523 HOMER1Q86YM7 354 aa17.33■□□□□ 0.36
SNHG9-201ENST00000531523 LY9Q9HBG7 655 aa17.33■□□□□ 0.36
SNHG9-201ENST00000531523 VCANP13611 3396 aa17.32■□□□□ 0.36
SNHG9-201ENST00000531523 EIF3JO75822 258 aaKnown RBP17.32■□□□□ 0.36
SNHG9-201ENST00000531523 HOXD8P13378 290 aaPredicted RBP17.32■□□□□ 0.36
SNHG9-201ENST00000531523 PGM5Q15124 567 aa17.32■□□□□ 0.36
SNHG9-201ENST00000531523 BRDTQ58F21 947 aaPredicted RBP17.32■□□□□ 0.36
SNHG9-201ENST00000531523 FAM47CQ5HY64 1035 aa17.32■□□□□ 0.36
SNHG9-201ENST00000531523 RALYLQ86SE5 291 aaKnown RBP17.32■□□□□ 0.36
SNHG9-201ENST00000531523 USP38Q8NB14 1042 aa17.32■□□□□ 0.36
SNHG9-201ENST00000531523 DHX38Q92620 1227 aaKnown RBP17.32■□□□□ 0.36
SNHG9-201ENST00000531523 MAP3K20Q9NYL2 800 aaKnown RBP17.32■□□□□ 0.36
SNHG9-201ENST00000531523 RBAK-RBAKDNI3L0D1 243 aa17.31■□□□□ 0.36
SNHG9-201ENST00000531523 HAS3O00219 553 aa17.31■□□□□ 0.36
SNHG9-201ENST00000531523 PITPNM1O00562 1244 aa17.31■□□□□ 0.36
SNHG9-201ENST00000531523 GPNMBQ14956 572 aa17.31■□□□□ 0.36
SNHG9-201ENST00000531523 TMEM67Q5HYA8 995 aa17.31■□□□□ 0.36
SNHG9-201ENST00000531523 GDF6Q6KF10 455 aaPredicted RBP17.31■□□□□ 0.36
SNHG9-201ENST00000531523 SKAP1Q86WV1 359 aa17.31■□□□□ 0.36
SNHG9-201ENST00000531523 SAMD3Q8N6K7 520 aa17.31■□□□□ 0.36
SNHG9-201ENST00000531523 GPKOWQ92917 476 aaPredicted RBP eCLIP17.31■□□□□ 0.36
SNHG9-201ENST00000531523 COL25A1Q9BXS0 654 aaPredicted RBP17.31■□□□□ 0.36
SNHG9-201ENST00000531523 NKX2-4Q9H2Z4 354 aa17.31■□□□□ 0.36
SNHG9-201ENST00000531523 SPTBN5Q9NRC6 3674 aaKnown RBP17.3■□□□□ 0.36
SNHG9-201ENST00000531523 PNMA6FA0A0J9YX94 578 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 F2P00734 622 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 PFKMP08237 780 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 IQCF3P0C7M6 154 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 SP2Q02086 613 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 RBL2Q08999 1139 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 VSIG10LQ86VR7 867 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 PPTC7Q8NI37 304 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 MAP3K14Q99558 947 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 MYL10Q9BUA6 226 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 MRVI1Q9Y6F6 885 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 REV3LO60673 3130 aa17.3■□□□□ 0.36
SNHG9-201ENST00000531523 COL4A4P53420 1690 aaPredicted RBP17.29■□□□□ 0.36
SNHG9-201ENST00000531523 ERICH2A1L162 156 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 ZNF286BP0CG31 522 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 RABGGTBP53611 331 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 ADGRE1Q14246 886 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 HIC1Q14526 733 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 RAB30Q15771 203 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 DEFB128Q7Z7B8 93 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 RPUSD2Q8IZ73 545 aaKnown RBP17.29■□□□□ 0.36
SNHG9-201ENST00000531523 ZNF654Q8IZM8 581 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 ZFP91Q96JP5 570 aaPredicted RBP17.29■□□□□ 0.36
SNHG9-201ENST00000531523 ESYT1Q9BSJ8 1104 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 SPZ1Q9BXG8 430 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 MTIF3Q9H2K0 278 aaKnown RBP17.29■□□□□ 0.36
SNHG9-201ENST00000531523 GTF2IRD1Q9UHL9 959 aa17.29■□□□□ 0.36
SNHG9-201ENST00000531523 GCOM1H8Y6P7 765 aaPredicted RBP17.28■□□□□ 0.36
SNHG9-201ENST00000531523 SH2B2O14492 632 aaPredicted RBP17.28■□□□□ 0.36
SNHG9-201ENST00000531523 SLC27A2O14975 620 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 DDAH1O94760 285 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 POLR2MP0CAP2 368 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 MYCLP12524 364 aaPredicted RBP17.28■□□□□ 0.36
SNHG9-201ENST00000531523 MYOGP15173 224 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 UBA1P22314 1058 aaKnown RBP17.28■□□□□ 0.36
SNHG9-201ENST00000531523 RFC2P35250 354 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 MRPS9P82933 396 aaKnown RBP17.28■□□□□ 0.36
SNHG9-201ENST00000531523 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 SART3Q15020 963 aaKnown RBP17.28■□□□□ 0.36
SNHG9-201ENST00000531523 NECTIN1Q15223 517 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 PTGISQ16647 500 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 DGKDQ16760 1214 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 HSDL1Q3SXM5 330 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 CELF3Q5SZQ8 465 aaKnown RBP17.28■□□□□ 0.36
SNHG9-201ENST00000531523 MYSM1Q5VVJ2 828 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 TRAF7Q6Q0C0 670 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 CATIPQ7Z7H3 387 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 WNT8BQ93098 351 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 MTA3Q9BTC8 594 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 PRDM12Q9H4Q4 367 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 HDAC6Q9UBN7 1215 aa17.28■□□□□ 0.36
SNHG9-201ENST00000531523 PRC1O43663 620 aa17.27■□□□□ 0.36
SNHG9-201ENST00000531523 PLEKHA8P1O95397 391 aa17.27■□□□□ 0.36
SNHG9-201ENST00000531523 CASTP20810 708 aaKnown RBP17.27■□□□□ 0.36
SNHG9-201ENST00000531523 PSEN2P49810 448 aa17.27■□□□□ 0.36
SNHG9-201ENST00000531523 LAMC2Q13753 1193 aa17.27■□□□□ 0.36
SNHG9-201ENST00000531523 BCAS3Q9H6U6 928 aa17.27■□□□□ 0.36
SNHG9-201ENST00000531523 MSRAQ9UJ68 235 aa17.27■□□□□ 0.36
SNHG9-201ENST00000531523 SLC4A7Q9Y6M7 1214 aa17.27■□□□□ 0.36
SNHG9-201ENST00000531523 SIP14410 1827 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms