RNA–Protein interactions for RNA: ENST00000531474.2

NXF1-209, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-209ENST00000531474 NPLOC4Q8TAT6 608 aa10.74□□□□□ -0.69
NXF1-209ENST00000531474 SYTL5Q8TDW5 730 aaPredicted RBP10.74□□□□□ -0.69
NXF1-209ENST00000531474 CCDC34Q96HJ3 373 aa10.74□□□□□ -0.69
NXF1-209ENST00000531474 PURBQ96QR8 312 aaKnown RBP10.74□□□□□ -0.69
NXF1-209ENST00000531474 SDF4Q9BRK5 362 aa10.74□□□□□ -0.69
NXF1-209ENST00000531474 PSTPIP2Q9H939 334 aa10.74□□□□□ -0.69
NXF1-209ENST00000531474 HOOK1Q9UJC3 728 aaKnown RBP10.74□□□□□ -0.69
NXF1-209ENST00000531474 NOL7Q9UMY1 257 aaKnown RBP10.74□□□□□ -0.69
NXF1-209ENST00000531474 PTPN22Q9Y2R2 807 aa10.74□□□□□ -0.69
NXF1-209ENST00000531474 CLIC4Q9Y696 253 aa10.74□□□□□ -0.69
NXF1-209ENST00000531474 PTCH2Q9Y6C5 1203 aa10.74□□□□□ -0.69
NXF1-209ENST00000531474 PLXNB2O15031 1838 aa10.74□□□□□ -0.69
NXF1-209ENST00000531474 ZNF236Q9UL36 1845 aa10.74□□□□□ -0.69
NXF1-209ENST00000531474 MGAMO43451 1857 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 DNAJC25-GNG10A0A024R161 153 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 ADCY3O60266 1144 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 HOXC6P09630 235 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 ELNP15502 786 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 KRT2P35908 639 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 HSD17B4P51659 736 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 MRPL12P52815 198 aaKnown RBP10.73□□□□□ -0.69
NXF1-209ENST00000531474 NLRP5P59047 1200 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 TYRO3Q06418 890 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 IRF5Q13568 498 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 SNW1Q13573 536 aaKnown RBP10.73□□□□□ -0.69
NXF1-209ENST00000531474 CCL14Q16627 93 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 UBE2SQ16763 222 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 ZNF792Q3KQV3 632 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 TPRNQ4KMQ1 711 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 USP17L6PQ6QN14 398 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 FCHSD1Q86WN1 690 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 DIS3L2Q8IYB7 885 aaKnown RBP10.73□□□□□ -0.69
NXF1-209ENST00000531474 FAM133AQ8N9E0 248 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 ZNF579Q8NAF0 562 aaKnown RBP10.73□□□□□ -0.69
NXF1-209ENST00000531474 FAM200AQ8TCP9 573 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 SHISA4Q96DD7 197 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 PHF20Q9BVI0 1012 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 NAT10Q9H0A0 1025 aaKnown RBP10.73□□□□□ -0.69
NXF1-209ENST00000531474 C6orf50Q9HD87 102 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 RIC8AQ9NPQ8 531 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 COL20A1Q9P218 1284 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 MYH6P13533 1939 aa10.73□□□□□ -0.69
NXF1-209ENST00000531474 FAM237AA0A1B0GTK4 181 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 ESYT2A0FGR8 921 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 SOWAHBA6NEL2 793 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 BTBD18B2RXH4 712 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 KIF28PB7ZC32 967 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 XRCC5P13010 732 aaKnown RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 GNA11P29992 359 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 TRAPPC10P48553 1259 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 GHRHRQ02643 423 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 PKN2Q16513 984 aaKnown RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 CAMK4Q16566 473 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 FBXO46Q6PJ61 603 aaPredicted RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 TRMT44Q8IYL2 757 aaKnown RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 FMR1NBQ8N0W7 255 aaPredicted RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 SAMD3Q8N6K7 520 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 KRI1Q8N9T8 703 aaKnown RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 SLAIN1Q8ND83 568 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 MAML3Q96JK9 1138 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 FGD4Q96M96 766 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 TAAR1Q96RJ0 339 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 MAF1Q9H063 256 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 ZMYND12Q9H0C1 365 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 GLT8D2Q9H1C3 349 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 GJB4Q9NTQ9 266 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 ANO10Q9NW15 660 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 MAP3K20Q9NYL2 800 aaKnown RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 BIN2Q9UBW5 565 aaPredicted RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 ADD3Q9UEY8 706 aaKnown RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 CCDC39Q9UFE4 941 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 KCNJ14Q9UNX9 436 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 DIS3Q9Y2L1 958 aaKnown RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 RBBP6Q7Z6E9 1792 aaKnown RBP10.72□□□□□ -0.69
NXF1-209ENST00000531474 CASP8AP2Q9UKL3 1982 aa10.72□□□□□ -0.69
NXF1-209ENST00000531474 SPDYE3A6NKU9 549 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 PIK3CDO00329 1044 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 ASTN1O14525 1302 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 MEIS2O14770 477 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 ZNF202O95125 648 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 TPM3P06753 285 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 EIF2AK2P19525 551 aaKnown RBP10.71□□□□□ -0.69
NXF1-209ENST00000531474 GRK4P32298 578 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 ALDH5A1P51649 535 aaPredicted RBP10.71□□□□□ -0.69
NXF1-209ENST00000531474 PTPAQ15257 358 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 SLC9C1Q4G0N8 1177 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 ARHGEF16Q5VV41 709 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 JAKMIP3Q5VZ66 844 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 MFSD14CQ5VZR4 134 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 OLFML2BQ68BL8 750 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 KANK3Q6NY19 840 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 REXO1Q8N1G1 1221 aaKnown RBP10.71□□□□□ -0.69
NXF1-209ENST00000531474 RNF214Q8ND24 703 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 PXYLP1Q8TE99 480 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 NSUN6Q8TEA1 469 aaKnown RBP10.71□□□□□ -0.69
NXF1-209ENST00000531474 SH3TC2Q8TF17 1288 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 TRIB2Q92519 343 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 RMDN3Q96TC7 470 aa10.71□□□□□ -0.69
NXF1-209ENST00000531474 MPHOSPH6Q99547 160 aaKnown RBP10.71□□□□□ -0.69
NXF1-209ENST00000531474 MCOLN1Q9GZU1 580 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms