RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PARP1P09874 1014 aaKnown RBP21.51■■□□□ 1.03
SSSCA1-206ENST00000531405 EIF2AK2P19525 551 aaKnown RBP21.51■■□□□ 1.03
SSSCA1-206ENST00000531405 BFSP2Q13515 415 aa21.51■■□□□ 1.03
SSSCA1-206ENST00000531405 GDF6Q6KF10 455 aaPredicted RBP21.51■■□□□ 1.03
SSSCA1-206ENST00000531405 FBXO11Q86XK2 927 aa21.51■■□□□ 1.03
SSSCA1-206ENST00000531405 KAT2BQ92831 832 aa21.51■■□□□ 1.03
SSSCA1-206ENST00000531405 SLC9A7Q96T83 725 aa21.51■■□□□ 1.03
SSSCA1-206ENST00000531405 DSCC1Q9BVC3 393 aa21.51■■□□□ 1.03
SSSCA1-206ENST00000531405 EPOPA6NHQ4 379 aa21.5■■□□□ 1.03
SSSCA1-206ENST00000531405 STXBP2Q15833 593 aa21.5■■□□□ 1.03
SSSCA1-206ENST00000531405 IMMTQ16891 758 aaKnown RBP21.5■■□□□ 1.03
SSSCA1-206ENST00000531405 MCF2L2Q86YR7 1114 aa21.5■■□□□ 1.03
SSSCA1-206ENST00000531405 STAG2Q8N3U4 1231 aa21.5■■□□□ 1.03
SSSCA1-206ENST00000531405 IL25Q9H293 177 aa21.5■■□□□ 1.03
SSSCA1-206ENST00000531405 MRPL11Q9Y3B7 192 aaKnown RBP21.5■■□□□ 1.03
SSSCA1-206ENST00000531405 CFBP00751 764 aa21.49■■□□□ 1.03
SSSCA1-206ENST00000531405 NT5C2P49902 561 aa21.49■■□□□ 1.03
SSSCA1-206ENST00000531405 AAMPQ13685 434 aa21.49■■□□□ 1.03
SSSCA1-206ENST00000531405 ARHGEF16Q5VV41 709 aa21.49■■□□□ 1.03
SSSCA1-206ENST00000531405 HERC6Q8IVU3 1022 aa21.49■■□□□ 1.03
SSSCA1-206ENST00000531405 DHX38Q92620 1227 aaKnown RBP21.49■■□□□ 1.03
SSSCA1-206ENST00000531405 IWS1Q96ST2 819 aa21.49■■□□□ 1.03
SSSCA1-206ENST00000531405 PXMP2Q9NR77 195 aa21.49■■□□□ 1.03
SSSCA1-206ENST00000531405 HIP1O00291 1037 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 OPLAHO14841 1288 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 TFF2Q03403 129 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 GPNMBQ14956 572 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 KRT40Q6A162 431 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 SPRED2Q7Z698 418 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 EXOC6Q8TAG9 804 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 PHOSPHO2Q8TCD6 241 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 UBAC1Q9BSL1 405 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 KRT23Q9C075 422 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 MAF1Q9H063 256 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 DDX41Q9UJV9 622 aaKnown RBP21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 MICAL3Q7RTP6 2002 aa21.48■■□□□ 1.03
SSSCA1-206ENST00000531405 BRWD1Q9NSI6 2320 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 PPP1R11O60927 126 aaPredicted RBP21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 ZNF286BP0CG31 522 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 CASTP20810 708 aaKnown RBP21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 TAP1Q03518 808 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 IFIT1BQ5T764 474 aaKnown RBP21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 TMCO2Q7Z6W1 182 aaPredicted RBP21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 SESTD1Q86VW0 696 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 CCDC155Q8N6L0 562 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 CAGE1Q8TC20 777 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 ARNTL2Q8WYA1 636 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 YTHDC1Q96MU7 727 aaKnown RBP21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 UHRF1Q96T88 793 aaPredicted RBP21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 ALG1Q9BT22 464 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 MTCH2Q9Y6C9 303 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 SIP14410 1827 aa21.47■■□□□ 1.03
SSSCA1-206ENST00000531405 SORBS3O60504 671 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 EIF3JO75822 258 aaKnown RBP21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 NR3C2P08235 984 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 SKIV2LQ15477 1246 aaKnown RBP21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 DGKDQ16760 1214 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 CYB5R4Q7L1T6 521 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 LRRC8DQ7L1W4 858 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 IL27Q8NEV9 243 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 AFAP1L1Q8TED9 768 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 NECAB3Q96P71 396 aaPredicted RBP21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 TSPYL2Q9H2G4 693 aaPredicted RBP21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 CNNM2Q9H8M5 875 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 HDAC6Q9UBN7 1215 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 GTF2IRD1Q9UHL9 959 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 CTNNA3Q9UI47 895 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 MRVI1Q9Y6F6 885 aa21.46■■□□□ 1.03
SSSCA1-206ENST00000531405 KLRF2D3W0D1 207 aa21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 BAIAP3O94812 1187 aa21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 MYCLP12524 364 aaPredicted RBP21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 SELPP16109 830 aa21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 PSEN2P49810 448 aa21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 HSD17B4P51659 736 aa21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 WDR5P61964 334 aaKnown RBP21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 SEC23AQ15436 765 aa21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 TCTN1Q2MV58 587 aa21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 C7orf31Q8N865 590 aa21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 AMNQ9BXJ7 453 aa21.45■■□□□ 1.02
SSSCA1-206ENST00000531405 LCHNA4D1U4 455 aa21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 GTPBP6O43824 516 aaPredicted RBP21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 TLL1O43897 1013 aa21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 CKBP12277 381 aa21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 HOXA13P31271 388 aaPredicted RBP21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 KCNJ6P48051 423 aa21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 DEFB103AP81534 67 aa21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 MFSD10Q14728 455 aa21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 DHX37Q8IY37 1157 aaKnown RBP21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 EMID1Q96A84 441 aaPredicted RBP21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 MAD2L2Q9UI95 211 aa21.44■■□□□ 1.02
SSSCA1-206ENST00000531405 KIF28PB7ZC32 967 aa21.43■■□□□ 1.02
SSSCA1-206ENST00000531405 NBNO60934 754 aa21.43■■□□□ 1.02
SSSCA1-206ENST00000531405 RGS20O76081 388 aa21.43■■□□□ 1.02
SSSCA1-206ENST00000531405 POU3F3P20264 500 aaPredicted RBP21.43■■□□□ 1.02
SSSCA1-206ENST00000531405 KCNQ1P51787 676 aa21.43■■□□□ 1.02
SSSCA1-206ENST00000531405 ZNF200P98182 395 aaPredicted RBP21.43■■□□□ 1.02
SSSCA1-206ENST00000531405 KIAA0753Q2KHM9 967 aa21.43■■□□□ 1.02
SSSCA1-206ENST00000531405 SLC35G1Q2M3R5 365 aa21.43■■□□□ 1.02
SSSCA1-206ENST00000531405 IL31RAQ8NI17 732 aa21.43■■□□□ 1.02
SSSCA1-206ENST00000531405 PPTC7Q8NI37 304 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms