RNA–Protein interactions for RNA: ENST00000531173.1

GSDMD-210, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-210ENST00000531173 DDX41Q9UJV9 622 aaKnown RBP19.32■□□□□ 0.68
GSDMD-210ENST00000531173 REV3LO60673 3130 aa19.32■□□□□ 0.68
GSDMD-210ENST00000531173 EIF3JO75822 258 aaKnown RBP19.31■□□□□ 0.68
GSDMD-210ENST00000531173 NR3C2P08235 984 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 MMP3P08254 477 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 PBX2P40425 430 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 GRIN2CQ14957 1233 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 BRDTQ58F21 947 aaPredicted RBP19.31■□□□□ 0.68
GSDMD-210ENST00000531173 ARHGEF16Q5VV41 709 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 RALYLQ86SE5 291 aaKnown RBP19.31■□□□□ 0.68
GSDMD-210ENST00000531173 SAMD3Q8N6K7 520 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 PPP1R13LQ8WUF5 828 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 MYLIPQ8WY64 445 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 PDCD2LQ9BRP1 358 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 LY9Q9HBG7 655 aa19.31■□□□□ 0.68
GSDMD-210ENST00000531173 NCOR1O75376 2440 aa19.3■□□□□ 0.68
GSDMD-210ENST00000531173 GH1P01241 217 aa19.3■□□□□ 0.68
GSDMD-210ENST00000531173 SUPT20HL2P0C7V6 817 aa19.3■□□□□ 0.68
GSDMD-210ENST00000531173 HOXA13P31271 388 aaPredicted RBP19.3■□□□□ 0.68
GSDMD-210ENST00000531173 PTPN11Q06124 597 aaPredicted RBP19.3■□□□□ 0.68
GSDMD-210ENST00000531173 WTAPQ15007 396 aa19.3■□□□□ 0.68
GSDMD-210ENST00000531173 SESTD1Q86VW0 696 aa19.3■□□□□ 0.68
GSDMD-210ENST00000531173 IL31RAQ8NI17 732 aa19.3■□□□□ 0.68
GSDMD-210ENST00000531173 TIFAQ96CG3 184 aa19.3■□□□□ 0.68
GSDMD-210ENST00000531173 SCLYQ96I15 445 aa19.3■□□□□ 0.68
GSDMD-210ENST00000531173 GPHNQ9NQX3 736 aaPredicted RBP19.3■□□□□ 0.68
GSDMD-210ENST00000531173 PNMA6FA0A0J9YX94 578 aa19.29■□□□□ 0.68
GSDMD-210ENST00000531173 FGBP02675 491 aa19.29■□□□□ 0.68
GSDMD-210ENST00000531173 HOXD8P13378 290 aaPredicted RBP19.29■□□□□ 0.68
GSDMD-210ENST00000531173 SART3Q15020 963 aaKnown RBP19.29■□□□□ 0.68
GSDMD-210ENST00000531173 TMEM67Q5HYA8 995 aa19.29■□□□□ 0.68
GSDMD-210ENST00000531173 VSIG10LQ86VR7 867 aa19.29■□□□□ 0.68
GSDMD-210ENST00000531173 HOMER1Q86YM7 354 aa19.29■□□□□ 0.68
GSDMD-210ENST00000531173 MAP3K14Q99558 947 aa19.29■□□□□ 0.68
GSDMD-210ENST00000531173 ZNF576Q9H609 170 aa19.29■□□□□ 0.68
GSDMD-210ENST00000531173 ERICH2A1L162 156 aa19.28■□□□□ 0.68
GSDMD-210ENST00000531173 PITPNM1O00562 1244 aa19.28■□□□□ 0.68
GSDMD-210ENST00000531173 PGM5Q15124 567 aa19.28■□□□□ 0.68
GSDMD-210ENST00000531173 OTOP2Q7RTS6 562 aa19.28■□□□□ 0.68
GSDMD-210ENST00000531173 ESYT1Q9BSJ8 1104 aa19.28■□□□□ 0.68
GSDMD-210ENST00000531173 MTA3Q9BTC8 594 aa19.28■□□□□ 0.68
GSDMD-210ENST00000531173 FRMPD4Q14CM0 1322 aa19.27■□□□□ 0.68
GSDMD-210ENST00000531173 DLL1O00548 723 aa19.27■□□□□ 0.68
GSDMD-210ENST00000531173 NECTIN1Q15223 517 aa19.27■□□□□ 0.68
GSDMD-210ENST00000531173 CATIPQ7Z7H3 387 aa19.27■□□□□ 0.68
GSDMD-210ENST00000531173 SKAP1Q86WV1 359 aa19.27■□□□□ 0.68
GSDMD-210ENST00000531173 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.27■□□□□ 0.68
GSDMD-210ENST00000531173 MAFAQ8NHW3 353 aaPredicted RBP19.27■□□□□ 0.68
GSDMD-210ENST00000531173 PPTC7Q8NI37 304 aa19.27■□□□□ 0.68
GSDMD-210ENST00000531173 SPZ1Q9BXG8 430 aa19.27■□□□□ 0.68
GSDMD-210ENST00000531173 MUC3AQ02505 3323 aa19.27■□□□□ 0.68
GSDMD-210ENST00000531173 DDAH1O94760 285 aa19.26■□□□□ 0.67
GSDMD-210ENST00000531173 SP2Q02086 613 aa19.26■□□□□ 0.67
GSDMD-210ENST00000531173 TRAF1Q13077 416 aa19.26■□□□□ 0.67
GSDMD-210ENST00000531173 FAM47CQ5HY64 1035 aa19.26■□□□□ 0.67
GSDMD-210ENST00000531173 MYSM1Q5VVJ2 828 aa19.26■□□□□ 0.67
GSDMD-210ENST00000531173 RPUSD2Q8IZ73 545 aaKnown RBP19.26■□□□□ 0.67
GSDMD-210ENST00000531173 ZNF654Q8IZM8 581 aa19.26■□□□□ 0.67
GSDMD-210ENST00000531173 YBX2Q9Y2T7 364 aaKnown RBP19.26■□□□□ 0.67
GSDMD-210ENST00000531173 MRVI1Q9Y6F6 885 aa19.26■□□□□ 0.67
GSDMD-210ENST00000531173 GCOM1H8Y6P7 765 aaPredicted RBP19.25■□□□□ 0.67
GSDMD-210ENST00000531173 HAS3O00219 553 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 SH2B2O14492 632 aaPredicted RBP19.25■□□□□ 0.67
GSDMD-210ENST00000531173 SLC27A2O14975 620 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 PRC1O43663 620 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 F2P00734 622 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 PFKMP08237 780 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 IQCF3P0C7M6 154 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 POLR2MP0CAP2 368 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 FOSL2P15408 326 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 SMARCA1P28370 1054 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 LAMC2Q13753 1193 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 GPNMBQ14956 572 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 DGKDQ16760 1214 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 BMP2KLQ5H9B9 411 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 GDF6Q6KF10 455 aaPredicted RBP19.25■□□□□ 0.67
GSDMD-210ENST00000531173 GPKOWQ92917 476 aaPredicted RBP eCLIP19.25■□□□□ 0.67
GSDMD-210ENST00000531173 MYL10Q9BUA6 226 aa19.25■□□□□ 0.67
GSDMD-210ENST00000531173 PTPRSQ13332 1948 aa19.24■□□□□ 0.67
GSDMD-210ENST00000531173 MYCLP12524 364 aaPredicted RBP19.24■□□□□ 0.67
GSDMD-210ENST00000531173 CASTP20810 708 aaKnown RBP19.24■□□□□ 0.67
GSDMD-210ENST00000531173 UBA1P22314 1058 aaKnown RBP19.24■□□□□ 0.67
GSDMD-210ENST00000531173 RFC2P35250 354 aa19.24■□□□□ 0.67
GSDMD-210ENST00000531173 RBL2Q08999 1139 aa19.24■□□□□ 0.67
GSDMD-210ENST00000531173 CELF3Q5SZQ8 465 aaKnown RBP19.24■□□□□ 0.67
GSDMD-210ENST00000531173 CREB3L3Q68CJ9 461 aa19.24■□□□□ 0.67
GSDMD-210ENST00000531173 DHX38Q92620 1227 aaKnown RBP19.24■□□□□ 0.67
GSDMD-210ENST00000531173 MTIF3Q9H2K0 278 aaKnown RBP19.24■□□□□ 0.67
GSDMD-210ENST00000531173 GTF2IRD1Q9UHL9 959 aa19.24■□□□□ 0.67
GSDMD-210ENST00000531173 DOCK5Q9H7D0 1870 aa19.24■□□□□ 0.67
GSDMD-210ENST00000531173 TGFB3P10600 412 aa19.23■□□□□ 0.67
GSDMD-210ENST00000531173 MCM5P33992 734 aa19.23■□□□□ 0.67
GSDMD-210ENST00000531173 LIFRP42702 1097 aa19.23■□□□□ 0.67
GSDMD-210ENST00000531173 MRPS9P82933 396 aaKnown RBP19.23■□□□□ 0.67
GSDMD-210ENST00000531173 RAB30Q15771 203 aa19.23■□□□□ 0.67
GSDMD-210ENST00000531173 PTGISQ16647 500 aa19.23■□□□□ 0.67
GSDMD-210ENST00000531173 HSDL1Q3SXM5 330 aa19.23■□□□□ 0.67
GSDMD-210ENST00000531173 KCNV1Q6PIU1 500 aa19.23■□□□□ 0.67
GSDMD-210ENST00000531173 FCHSD1Q86WN1 690 aa19.23■□□□□ 0.67
GSDMD-210ENST00000531173 TMEM87BQ96K49 555 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms