RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 PGM5Q15124 567 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 IQSEC1Q6DN90 963 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 REXO1Q8N1G1 1221 aaKnown RBP17.51■□□□□ 0.39
CCS-206ENST00000530961 AIFM3Q96NN9 605 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 PCDHA4Q9UN74 947 aa17.51■□□□□ 0.39
CCS-206ENST00000530961 GJA8P48165 433 aa17.5■□□□□ 0.39
CCS-206ENST00000530961 CCDC144BQ3MJ40 725 aa17.5■□□□□ 0.39
CCS-206ENST00000530961 PCNX4Q63HM2 1172 aa17.5■□□□□ 0.39
CCS-206ENST00000530961 EEPD1Q7L9B9 569 aa17.5■□□□□ 0.39
CCS-206ENST00000530961 DAGLBQ8NCG7 672 aa17.5■□□□□ 0.39
CCS-206ENST00000530961 U2AF1L4Q8WU68 220 aaKnown RBP17.5■□□□□ 0.39
CCS-206ENST00000530961 SHISA4Q96DD7 197 aa17.5■□□□□ 0.39
CCS-206ENST00000530961 FAM122AQ96E09 287 aa17.5■□□□□ 0.39
CCS-206ENST00000530961 MTMR10Q9NXD2 777 aa17.5■□□□□ 0.39
CCS-206ENST00000530961 KIF3AQ9Y496 699 aa17.5■□□□□ 0.39
CCS-206ENST00000530961 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.5■□□□□ 0.39
CCS-206ENST00000530961 RBM47A0AV96 593 aaKnown RBP17.49■□□□□ 0.39
CCS-206ENST00000530961 RARBP10826 455 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 MYCLP12524 364 aaPredicted RBP17.49■□□□□ 0.39
CCS-206ENST00000530961 TRIM29Q14134 588 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 LHX8Q68G74 356 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 TAPT1Q6NXT6 567 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 Q7L0L9 218 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 FBXO16Q8IX29 292 aaPredicted RBP17.49■□□□□ 0.39
CCS-206ENST00000530961 FAM184AQ8NB25 1140 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 SCFD2Q8WU76 684 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 PHF20Q9BVI0 1012 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 CRISPLD2Q9H0B8 497 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 DDX49Q9Y6V7 483 aaKnown RBP17.49■□□□□ 0.39
CCS-206ENST00000530961 ZSWIM8A7E2V4 1837 aa17.49■□□□□ 0.39
CCS-206ENST00000530961 TNFAIP2Q03169 654 aa17.48■□□□□ 0.39
CCS-206ENST00000530961 CUL4AQ13619 759 aa17.48■□□□□ 0.39
CCS-206ENST00000530961 JAKMIP3Q5VZ66 844 aa17.48■□□□□ 0.39
CCS-206ENST00000530961 KCNV1Q6PIU1 500 aa17.48■□□□□ 0.39
CCS-206ENST00000530961 BLIDQ8IZY5 108 aa17.48■□□□□ 0.39
CCS-206ENST00000530961 ANO3Q9BYT9 981 aa17.48■□□□□ 0.39
CCS-206ENST00000530961 BRMS1Q9HCU9 246 aa17.48■□□□□ 0.39
CCS-206ENST00000530961 OGDHLQ9ULD0 1010 aa17.48■□□□□ 0.39
CCS-206ENST00000530961 Q9Y3F1 56 aa17.48■□□□□ 0.39
CCS-206ENST00000530961 K7ELQ4 463 aaPredicted RBP17.47■□□□□ 0.39
CCS-206ENST00000530961 DTNBO60941 627 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 DUSP11O75319 330 aaKnown RBP17.47■□□□□ 0.39
CCS-206ENST00000530961 TFRCP02786 760 aaKnown RBP17.47■□□□□ 0.39
CCS-206ENST00000530961 SREBF1P36956 1147 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 ADCYAP1R1P41586 468 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 TTLL4Q14679 1199 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 GNPTABQ3T906 1256 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 SEPT14Q6ZU15 432 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 IL31RAQ8NI17 732 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 WDR11Q9BZH6 1224 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 PDGFCQ9NRA1 345 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 TMEM260Q9NX78 707 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 KCNJ14Q9UNX9 436 aa17.47■□□□□ 0.39
CCS-206ENST00000530961 VCANP13611 3396 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 NKRFO15226 690 aaKnown RBP eCLIP17.46■□□□□ 0.39
CCS-206ENST00000530961 TGFB3P10600 412 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 MRPS9P82933 396 aaKnown RBP17.46■□□□□ 0.39
CCS-206ENST00000530961 NPY5RQ15761 445 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 DUSP28Q4G0W2 176 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 NLRX1Q86UT6 975 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 HSCBQ8IWL3 235 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 ARRDC4Q8NCT1 418 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 INPP4AQ96PE3 977 aaPredicted RBP17.46■□□□□ 0.39
CCS-206ENST00000530961 SPC25Q9HBM1 224 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 SMC3Q9UQE7 1217 aa17.46■□□□□ 0.39
CCS-206ENST00000530961 GNEQ9Y223 722 aaKnown RBP17.46■□□□□ 0.39
CCS-206ENST00000530961 COL11A1P12107 1806 aaPredicted RBP17.46■□□□□ 0.39
CCS-206ENST00000530961 M0R2N6 131 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 MAFGO15525 162 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 CYP3A4P08684 503 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 SMPD1P17405 629 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 ARHGAP4P98171 946 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 SAFBQ15424 915 aaKnown RBP eCLIP17.45■□□□□ 0.38
CCS-206ENST00000530961 KRT40Q6A162 431 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 CCDC62Q6P9F0 684 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 KRT25Q7Z3Z0 450 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 ANKLE1Q8NAG6 615 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 RASGRP4Q8TDF6 673 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 INTS4Q96HW7 963 aaKnown RBP17.45■□□□□ 0.38
CCS-206ENST00000530961 CDHR1Q96JP9 859 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 PGBD1Q96JS3 809 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 XPNPEP3Q9NQH7 507 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 GJB4Q9NTQ9 266 aa17.45■□□□□ 0.38
CCS-206ENST00000530961 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.44■□□□□ 0.38
CCS-206ENST00000530961 ADAMTS3O15072 1205 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 RGS20O76081 388 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 MMP1P03956 469 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 TXNP10599 105 aaKnown RBP17.44■□□□□ 0.38
CCS-206ENST00000530961 ICAM3P32942 547 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 KRT2P35908 639 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 USP11P51784 963 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 NKX3-2P78367 333 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 ANO1Q5XXA6 986 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 FBXO18Q8NFZ0 1043 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 CRYGNQ8WXF5 182 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 GPRASP2Q96D09 838 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 RTEL1Q9NZ71 1219 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 UBIAD1Q9Y5Z9 338 aa17.44■□□□□ 0.38
CCS-206ENST00000530961 MRVI1Q9Y6F6 885 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms