RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 NSUN6Q8TEA1 469 aaKnown RBP12.09□□□□□ -0.47
SOX6-213ENST00000530378 CRYGNQ8WXF5 182 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 FGD4Q96M96 766 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 CLIC6Q96NY7 704 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 ZNF236Q9UL36 1845 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 FRMPD4Q14CM0 1322 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 SORBS3O60504 671 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 NR3C2P08235 984 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 MCM4P33991 863 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 MRPS9P82933 396 aaKnown RBP12.09□□□□□ -0.47
SOX6-213ENST00000530378 NFKBIBQ15653 356 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 DPP9Q86TI2 863 aa12.09□□□□□ -0.47
SOX6-213ENST00000530378 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
SOX6-213ENST00000530378 SCAND2PQ9GZW5 306 aaPredicted RBP12.09□□□□□ -0.47
SOX6-213ENST00000530378 VWA3AA6NCI4 1184 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 CCND2P30279 289 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 PSMC4P43686 418 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 LACTBP83111 547 aaPredicted RBP12.08□□□□□ -0.48
SOX6-213ENST00000530378 GRB14Q14449 540 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 SLC39A14Q15043 492 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 CALCRLQ16602 461 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 MCTP2Q6DN12 878 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 CLEC17AQ6ZS10 378 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 LENG9Q96B70 501 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 TRIM47Q96LD4 638 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 WDR11Q9BZH6 1224 aa12.08□□□□□ -0.48
SOX6-213ENST00000530378 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
SOX6-213ENST00000530378 DNAJC25-GNG10A0A024R161 153 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 GOLGA6L22H0YM25 854 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 DDX39AO00148 427 aaKnown RBP12.07□□□□□ -0.48
SOX6-213ENST00000530378 MARCH6O60337 910 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 YEATS4O95619 227 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 OR52Z1P0C646 297 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 ITGB5P18084 799 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 CYP2B6P20813 491 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 TXKP42681 527 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 USP11P51784 963 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 ATP2C1P98194 919 aaPredicted RBP12.07□□□□□ -0.48
SOX6-213ENST00000530378 PDE4DQ08499 809 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 IL17AQ16552 155 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 PCNX4Q63HM2 1172 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 PLA2G4DQ86XP0 818 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 CD99L2Q8TCZ2 262 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 ADD3Q9UEY8 706 aaKnown RBP12.07□□□□□ -0.48
SOX6-213ENST00000530378 RCOR1Q9UKL0 485 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 PCDHA7Q9UN72 937 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 CEP131Q9UPN4 1083 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 IGLV3-22A0A075B6J6 115 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 CYP3A4P08684 503 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 ARP10275 920 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 SP3Q02447 781 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 CEP55Q53EZ4 464 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 ATL3Q6DD88 541 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 SEPT14Q6ZU15 432 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 FBXO16Q8IX29 292 aaPredicted RBP12.07□□□□□ -0.48
SOX6-213ENST00000530378 C4orf32Q8N8J7 132 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 NPLOC4Q8TAT6 608 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 KCNG4Q8TDN1 519 aa12.07□□□□□ -0.48
SOX6-213ENST00000530378 FBXO2Q9UK22 296 aaPredicted RBP12.07□□□□□ -0.48
SOX6-213ENST00000530378 SLC15A5A6NIM6 579 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 PP2D1A8MPX8 630 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 MSH4O15457 936 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 STRNO43815 780 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 GCFC2P16383 781 aaKnown RBP12.06□□□□□ -0.48
SOX6-213ENST00000530378 FCGRTP55899 365 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
SOX6-213ENST00000530378 CCL14Q16627 93 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 ZNF792Q3KQV3 632 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 MORN1Q5T089 497 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 PPP4R3AQ6IN85 833 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.06□□□□□ -0.48
SOX6-213ENST00000530378 ARMCX2Q7L311 632 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 VSIG10LQ86VR7 867 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 SAMD3Q8N6K7 520 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 DNERQ8NFT8 737 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 HAS1Q92839 578 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 MXRA8Q9BRK3 442 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 LMBRD1Q9NUN5 540 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 GABRQQ9UN88 632 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 CASP8AP2Q9UKL3 1982 aa12.06□□□□□ -0.48
SOX6-213ENST00000530378 CYP3A7-CYP3A51PA0A087WV96 503 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 GOLGA6L4A6NEF3 574 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 POTEMA6NI47 508 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 GPR25O00155 361 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 CHMP2AO43633 222 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 RGS20O76081 388 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 PTGS1P23219 599 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 CYP3A7P24462 503 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 CDC25AP30304 524 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 CIITAP33076 1130 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 PRKCZQ05513 592 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 MAP2K5Q13163 448 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 MTMR1Q13613 665 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 Q4G0T1 1027 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 TEX2Q8IWB9 1127 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 KRI1Q8N9T8 703 aaKnown RBP12.05□□□□□ -0.48
SOX6-213ENST00000530378 TMEM87AQ8NBN3 555 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 MAML3Q96JK9 1138 aa12.05□□□□□ -0.48
SOX6-213ENST00000530378 NUDT12Q9BQG2 462 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms