RNA–Protein interactions for RNA: ENST00000530226.1

SIPA1-206, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 2

Gene SIPA1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-206ENST00000530226 FAM161BQ96MY7 647 aa16.37■□□□□ 0.21
SIPA1-206ENST00000530226 PDCD2LQ9BRP1 358 aa16.37■□□□□ 0.21
SIPA1-206ENST00000530226 NOC4LQ9BVI4 516 aaKnown RBP16.37■□□□□ 0.21
SIPA1-206ENST00000530226 TRPV6Q9H1D0 765 aa16.37■□□□□ 0.21
SIPA1-206ENST00000530226 MTIF3Q9H2K0 278 aaKnown RBP16.37■□□□□ 0.21
SIPA1-206ENST00000530226 TMEM265A0A087WTH1 108 aa16.36■□□□□ 0.21
SIPA1-206ENST00000530226 MMP3P08254 477 aa16.36■□□□□ 0.21
SIPA1-206ENST00000530226 CCND2P30279 289 aa16.36■□□□□ 0.21
SIPA1-206ENST00000530226 CYP2C18P33260 490 aa16.36■□□□□ 0.21
SIPA1-206ENST00000530226 LIFRP42702 1097 aa16.36■□□□□ 0.21
SIPA1-206ENST00000530226 ARHGAP1Q07960 439 aa16.36■□□□□ 0.21
SIPA1-206ENST00000530226 NECTIN1Q15223 517 aa16.36■□□□□ 0.21
SIPA1-206ENST00000530226 KCNV1Q6PIU1 500 aa16.36■□□□□ 0.21
SIPA1-206ENST00000530226 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.36■□□□□ 0.21
SIPA1-206ENST00000530226 MYL10Q9BUA6 226 aa16.36■□□□□ 0.21
SIPA1-206ENST00000530226 CHD9Q3L8U1 2897 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 CUL9Q8IWT3 2517 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 SMARCA1P28370 1054 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 PTPN11Q06124 597 aaPredicted RBP16.35■□□□□ 0.21
SIPA1-206ENST00000530226 PGM5Q15124 567 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 LY6KQ17RY6 165 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 AFG1LQ8WV93 481 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
SIPA1-206ENST00000530226 CCDC136Q96JN2 1154 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 CDX2Q99626 313 aaPredicted RBP16.35■□□□□ 0.21
SIPA1-206ENST00000530226 TTYH1Q9H313 450 aaPredicted RBP16.35■□□□□ 0.21
SIPA1-206ENST00000530226 IL23AQ9NPF7 189 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 TRMT13Q9NUP7 481 aaKnown RBP16.35■□□□□ 0.21
SIPA1-206ENST00000530226 SLC12A7Q9Y666 1083 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 MYH7BA7E2Y1 1941 aa16.35■□□□□ 0.21
SIPA1-206ENST00000530226 MYCLP12524 364 aaPredicted RBP16.34■□□□□ 0.21
SIPA1-206ENST00000530226 DGKDQ16760 1214 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 NBPF20Q3BBV1 942 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 TMEM240Q5SV17 173 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 FCHSD1Q86WN1 690 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 PPTC7Q8NI37 304 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 PIBF1Q8WXW3 757 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 KATNAL1Q9BW62 490 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 DDX41Q9UJV9 622 aaKnown RBP16.34■□□□□ 0.21
SIPA1-206ENST00000530226 NOD1Q9Y239 953 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 FRMPD4Q14CM0 1322 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 UMODL1Q5DID0 1318 aa16.34■□□□□ 0.21
SIPA1-206ENST00000530226 CASTP20810 708 aaKnown RBP16.33■□□□□ 0.2
SIPA1-206ENST00000530226 LAMC2Q13753 1193 aa16.33■□□□□ 0.2
SIPA1-206ENST00000530226 KRT32Q14532 448 aa16.33■□□□□ 0.2
SIPA1-206ENST00000530226 GNPTABQ3T906 1256 aa16.33■□□□□ 0.2
SIPA1-206ENST00000530226 SGMS1Q86VZ5 419 aa16.33■□□□□ 0.2
SIPA1-206ENST00000530226 MICU3Q86XE3 530 aa16.33■□□□□ 0.2
SIPA1-206ENST00000530226 IL31RAQ8NI17 732 aa16.33■□□□□ 0.2
SIPA1-206ENST00000530226 CUL5Q93034 780 aa16.33■□□□□ 0.2
SIPA1-206ENST00000530226 WNT8AQ9H1J5 351 aa16.33■□□□□ 0.2
SIPA1-206ENST00000530226 GBF1Q92538 1859 aa16.33■□□□□ 0.2
SIPA1-206ENST00000530226 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.32■□□□□ 0.2
SIPA1-206ENST00000530226 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.32■□□□□ 0.2
SIPA1-206ENST00000530226 PITPNM1O00562 1244 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 STAM2O75886 525 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 PLEKHA8P1O95397 391 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 PFKMP08237 780 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 ACRP10323 421 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 CYP2C9P11712 490 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 DNAJB2P25686 324 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 CCL23P55773 120 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 CHMP4BP1P59074 171 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 RASIP1Q5U651 963 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 SYNE3Q6ZMZ3 975 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 ZNF365Q70YC5 407 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 C16orf59Q7L2K0 433 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 VSIG10LQ86VR7 867 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
SIPA1-206ENST00000530226 CCDC155Q8N6L0 562 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 SMARCC2Q8TAQ2 1214 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 NEK1Q96PY6 1258 aa16.32■□□□□ 0.2
SIPA1-206ENST00000530226 SCN5AQ14524 2016 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 PIK3CDO00329 1044 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 F2P00734 622 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 TGFB3P10600 412 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 RXRAP19793 462 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 UBA1P22314 1058 aaKnown RBP16.31■□□□□ 0.2
SIPA1-206ENST00000530226 BFSP2Q13515 415 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 TMTC3Q6ZXV5 915 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 SESTD1Q86VW0 696 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.31■□□□□ 0.2
SIPA1-206ENST00000530226 RPUSD2Q8IZ73 545 aaKnown RBP16.31■□□□□ 0.2
SIPA1-206ENST00000530226 HERVK_113Q902F9 699 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 LRRC2Q9BYS8 371 aa16.31■□□□□ 0.2
SIPA1-206ENST00000530226 RGS20O76081 388 aa16.3■□□□□ 0.2
SIPA1-206ENST00000530226 GGPS1O95749 300 aa16.3■□□□□ 0.2
SIPA1-206ENST00000530226 NEFLP07196 543 aa16.3■□□□□ 0.2
SIPA1-206ENST00000530226 ZNF286BP0CG31 522 aa16.3■□□□□ 0.2
SIPA1-206ENST00000530226 RFC2P35250 354 aa16.3■□□□□ 0.2
SIPA1-206ENST00000530226 SRBD1Q8N5C6 995 aaKnown RBP16.3■□□□□ 0.2
SIPA1-206ENST00000530226 TIFAQ96CG3 184 aa16.3■□□□□ 0.2
SIPA1-206ENST00000530226 SPATA33Q96N06 139 aa16.3■□□□□ 0.2
SIPA1-206ENST00000530226 RBM28Q9NW13 759 aaKnown RBP16.3■□□□□ 0.2
SIPA1-206ENST00000530226 DOCK5Q9H7D0 1870 aa16.29■□□□□ 0.2
SIPA1-206ENST00000530226 FGBP02675 491 aa16.29■□□□□ 0.2
SIPA1-206ENST00000530226 HMGB1P09429 215 aaKnown RBP16.29■□□□□ 0.2
SIPA1-206ENST00000530226 HOXD8P13378 290 aaPredicted RBP16.29■□□□□ 0.2
SIPA1-206ENST00000530226 COL9A3Q14050 684 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms