RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 MYL1P05976 194 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 GOLGA6DP0CG33 693 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 YBX3P16989 372 aaKnown RBP eCLIP8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 COL8A1P27658 744 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 SESN3P58005 492 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 KLF1Q13351 362 aaPredicted RBP8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 BIRC2Q13490 618 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 ARHGAP44Q17R89 818 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 C2orf69Q8N8R5 385 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 CLRN3Q8NCR9 226 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 PANK1Q8TE04 598 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 PTCHD1Q96NR3 888 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 RPS6KC1Q96S38 1066 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 SLC13A1Q9BZW2 595 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 OXSMQ9NWU1 459 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 GOLGA6AQ9NYA3 693 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 H2AFY2Q9P0M6 372 aaPredicted RBP8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 TCFL5Q9UL49 500 aa8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 LUC7L2Q9Y383 392 aaKnown RBP8.4□□□□□ -1.06
CAPRIN1-208ENST00000530008 SSU72P8A0A1W2PR75 194 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 FZD9O00144 591 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 MYO1BO43795 1136 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 MT-CO1P00395 513 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 GRIK1P39086 918 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 GFOD2Q3B7J2 385 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 CPNE8Q86YQ8 564 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 SLC5A5Q92911 643 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 FOXP3Q9BZS1 431 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 CBLCQ9ULV8 474 aa8.39□□□□□ -1.07
CAPRIN1-208ENST00000530008 WASH4PA8MWX3 477 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 SNUPNO95149 360 aaKnown RBP8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 CCND1P24385 295 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 TPP2P29144 1249 aaPredicted RBP8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 LSAMPQ13449 338 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 CRY1Q16526 586 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 RGL3Q3MIN7 710 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 CDKAL1Q5VV42 579 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 CXorf57Q6NSI4 855 aaKnown RBP8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 RNF111Q6ZNA4 994 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 OTOP1Q7RTM1 612 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 EFHBQ8N7U6 833 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 CDADC1Q9BWV3 514 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 TCF7L1Q9HCS4 588 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 CATSPERZQ9NTU4 200 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 FBXL7Q9UJT9 491 aa8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 TIMM13Q9Y5L4 95 aaPredicted RBP8.38□□□□□ -1.07
CAPRIN1-208ENST00000530008 WASHC2AQ641Q2 1341 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 FAM170BA6NMN3 283 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 FKTNO75072 461 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 EIF3JO75822 258 aaKnown RBP8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 CT47B1P0C2W7 299 aaPredicted RBP8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 LACTBP83111 547 aaPredicted RBP8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 TCIRG1Q13488 830 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 HDAC1Q13547 482 aaPredicted RBP8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 LAPTM5Q13571 262 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 PCBP2Q15366 365 aaKnown RBP eCLIP8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 DDB1Q16531 1140 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 ZNF765Q7L2R6 523 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 SMC5Q8IY18 1101 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 SHISA5Q8N114 240 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 CHAMP1Q96JM3 812 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 SCYL1Q96KG9 808 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 CDIP1Q9H305 208 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 C7orf69Q9H7B7 122 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 C14orf119Q9NWQ9 140 aa8.37□□□□□ -1.07
CAPRIN1-208ENST00000530008 HMX2A2RU54 273 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 TGM5O43548 720 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 ENDOUP21128 410 aaKnown RBP8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 BCL6P41182 706 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 OXCT1P55809 520 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 RPL11P62913 178 aaKnown RBP8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 CYP27A1Q02318 531 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 NKPD1Q17RQ9 610 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 GAB4Q2WGN9 574 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 BROXQ5VW32 411 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 PPP4R4Q6NUP7 873 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 SLC4A10Q6U841 1118 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 TPH2Q8IWU9 490 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 C1orf162Q8NEQ5 155 aaPredicted RBP8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 KCNJ15Q99712 375 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 SPOCK3Q9BQ16 436 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 U3KQE9 123 aa8.36□□□□□ -1.07
CAPRIN1-208ENST00000530008 C7orf72A4D263 438 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 H3BS24 57 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 H7C1D1 291 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 TBC1D8O95759 1140 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 U2AF1L5P0DN76 240 aaPredicted RBP8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 RECQLP46063 649 aaPredicted RBP8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 GTF2A2P52657 109 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 U2AF1Q01081 240 aaKnown RBP eCLIP8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 CYP2R1Q6VVX0 501 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 DGKHQ86XP1 1220 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 CPA6Q8N4T0 437 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 NAT16Q8N8M0 369 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 FAXDC2Q96IV6 333 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 SSBP4Q9BWG4 385 aaPredicted RBP8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 BOCQ9BWV1 1114 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 CLDND1Q9NY35 253 aa8.35□□□□□ -1.07
CAPRIN1-208ENST00000530008 ZSWIM5Q9P217 1185 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms