RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 ASTN1O14525 1302 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 PPFIA4O75335 1185 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 CALM1P0DP23 149 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 CALM2P0DP24 149 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 CALM3P0DP25 149 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 HOXB1P14653 301 aaPredicted RBP9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 ITGB8P26012 769 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 PURAQ00577 322 aaKnown RBP9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 NFXL1Q6ZNB6 911 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 SEPT14Q6ZU15 432 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 STOX1Q6ZVD7 989 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 ZNF365Q70YC5 407 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 CENPQQ7L2Z9 268 aaPredicted RBP9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 STAG2Q8N3U4 1231 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 IGDCC4Q8TDY8 1250 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 CUL5Q93034 780 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 ALDH8A1Q9H2A2 487 aaPredicted RBP9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 CPVLQ9H3G5 476 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 MAD2L2Q9UI95 211 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 MSRAQ9UJ68 235 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 NOD1Q9Y239 953 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 BRCA2P51587 3418 aa9.07□□□□□ -0.96
CCDC90B-212ENST00000529312 CCDC69A6NI79 296 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 STAM2O75886 525 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 PARNO95453 639 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 PFKMP08237 780 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 ACTN1P12814 892 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 HOXB3P14651 431 aaPredicted RBP9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 CSF2RAP15509 400 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 CYP2C18P33260 490 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 RFC2P35250 354 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 LIFRP42702 1097 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 HSD17B4P51659 736 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 GHRHRQ02643 423 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 TROAPQ12815 778 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 BFSP2Q13515 415 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 DGKDQ16760 1214 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 NBPF20Q3BBV1 942 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 FAM47CQ5HY64 1035 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 TMEM240Q5SV17 173 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 CCDC62Q6P9F0 684 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 Q7L0L9 218 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 VSIG10LQ86VR7 867 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 DHX37Q8IY37 1157 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 CCDC155Q8N6L0 562 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 HERVK_113Q902F9 699 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 RRP36Q96EU6 259 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 PPP1R12CQ9BZL4 782 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 TRPV6Q9H1D0 765 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 PXMP2Q9NR77 195 aa9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 DDX41Q9UJV9 622 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 RBM8AQ9Y5S9 174 aaKnown RBP9.06□□□□□ -0.96
CCDC90B-212ENST00000529312 GRIN2DO15399 1336 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 MCM3APO60318 1980 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 DDAH1O94760 285 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 MYCLP12524 364 aaPredicted RBP9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 EIF2AK2P19525 551 aaKnown RBP9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 CCND2P30279 289 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 EPHB4P54760 987 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 PSMC6P62333 389 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 RAB30Q15771 203 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 GNPTABQ3T906 1256 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 BMP2KLQ5H9B9 411 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 XRRA1Q6P2D8 792 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 C16orf59Q7L2K0 433 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 HOMER1Q86YM7 354 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 EMID1Q96A84 441 aaPredicted RBP9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 PIGSQ96S52 555 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 ESYT1Q9BSJ8 1104 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 NOC4LQ9BVI4 516 aaKnown RBP9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 KATNAL1Q9BW62 490 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 IL25Q9H293 177 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 SEC63Q9UGP8 760 aaKnown RBP9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 SLC12A7Q9Y666 1083 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 MRVI1Q9Y6F6 885 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 DDX49Q9Y6V7 483 aaKnown RBP9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 FRMPD3Q5JV73 1810 aa9.05□□□□□ -0.96
CCDC90B-212ENST00000529312 PRC1O43663 620 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 B4GALT4O60513 344 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 ACRP10323 421 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 CCL23P55773 120 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 NEDD9Q14511 834 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 KRT32Q14532 448 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 NECTIN1Q15223 517 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 LY6KQ17RY6 165 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 TMEM63BQ5T3F8 832 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 RASIP1Q5U651 963 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 CHST3Q7LGC8 479 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 FCHSD1Q86WN1 690 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 TEX2Q8IWB9 1127 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 MB21D2Q8IYB1 491 aaPredicted RBP9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 C7orf31Q8N865 590 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 SMARCC2Q8TAQ2 1214 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 AFG1LQ8WV93 481 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 COPS5Q92905 334 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 FAM161BQ96MY7 647 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 CDX2Q99626 313 aaPredicted RBP9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 PDCD2LQ9BRP1 358 aa9.04□□□□□ -0.96
CCDC90B-212ENST00000529312 SPZ1Q9BXG8 430 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms