RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 SYNGAP1Q96PV0 1343 aa13.04□□□□□ -0.32
CAPN1-217ENST00000529133 FAM86B1E9PN63 330 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 ADCY3O60266 1144 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 TDP2O95551 362 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 FAM86B2P0C5J1 330 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 ELNP15502 786 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 CIITAP33076 1130 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 TRAPPC10P48553 1259 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 TOB1P50616 345 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-217ENST00000529133 STXBP2Q15833 593 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 LETM2Q2VYF4 491 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 TTC38Q5R3I4 469 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 CTU1Q7Z7A3 348 aaKnown RBP13.03□□□□□ -0.32
CAPN1-217ENST00000529133 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
CAPN1-217ENST00000529133 KATNBL1Q9H079 304 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 CHMP5Q9NZZ3 219 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 UBIAD1Q9Y5Z9 338 aa13.03□□□□□ -0.32
CAPN1-217ENST00000529133 PLXNA1Q9UIW2 1896 aa13.02□□□□□ -0.32
CAPN1-217ENST00000529133 IGLV3-22A0A075B6J6 115 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 CYP3A7-CYP3A51PA0A087WV96 503 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 EIF3JO75822 258 aaKnown RBP13.02□□□□□ -0.33
CAPN1-217ENST00000529133 STAM2O75886 525 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 ITGB5P18084 799 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 CYP3A7P24462 503 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 CYP2C19P33261 490 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 ZNF76P36508 570 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 NBR1Q14596 966 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 CEP55Q53EZ4 464 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 RILPL1Q5EBL4 403 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 MOXD1Q6UVY6 613 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 EEPD1Q7L9B9 569 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 FBXO16Q8IX29 292 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-217ENST00000529133 CYP2W1Q8TAV3 490 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 PXYLP1Q8TE99 480 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 MBOAT7Q96N66 472 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 INPP4AQ96PE3 977 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-217ENST00000529133 NAP1L4Q99733 375 aaKnown RBP13.02□□□□□ -0.33
CAPN1-217ENST00000529133 MXRA8Q9BRK3 442 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 RTEL1Q9NZ71 1219 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 PTPN22Q9Y2R2 807 aa13.02□□□□□ -0.33
CAPN1-217ENST00000529133 CASP8AP2Q9UKL3 1982 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 SLC37A4O43826 429 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 CCNT1O60563 726 aaKnown RBP13.01□□□□□ -0.33
CAPN1-217ENST00000529133 RGS20O76081 388 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 HMGCRP04035 888 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 GCFC2P16383 781 aaKnown RBP13.01□□□□□ -0.33
CAPN1-217ENST00000529133 TRIM32Q13049 653 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 PRR16Q569H4 304 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 MFSD14CQ5VZR4 134 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 PPP4R3AQ6IN85 833 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 NIPA1Q7RTP0 329 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 SLAIN1Q8ND83 568 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 LENG9Q96B70 501 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 GPRASP2Q96D09 838 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 VTA1Q9NP79 307 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 JADE2Q9NQC1 790 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 DDX25Q9UHL0 483 aaKnown RBP13.01□□□□□ -0.33
CAPN1-217ENST00000529133 CNPY2Q9Y2B0 182 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 PCDHB6Q9Y5E3 794 aa13.01□□□□□ -0.33
CAPN1-217ENST00000529133 ZNFX1Q9P2E3 1918 aaKnown RBP13□□□□□ -0.33
CAPN1-217ENST00000529133 MEIS1O00470 390 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 ZNF865P0CJ78 1059 aaPredicted RBP13□□□□□ -0.33
CAPN1-217ENST00000529133 MCM7P33993 719 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 SETQ01105 290 aaPredicted RBP13□□□□□ -0.33
CAPN1-217ENST00000529133 SEMA3FQ13275 785 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 ORC2Q13416 577 aaPredicted RBP13□□□□□ -0.33
CAPN1-217ENST00000529133 ACVR2BQ13705 512 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 ZNF174Q15697 407 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 FOXD4L6Q3SYB3 417 aaPredicted RBP13□□□□□ -0.33
CAPN1-217ENST00000529133 GNPTABQ3T906 1256 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 Q4G0T1 1027 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 PRAMEF19Q5SWL8 479 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 TAPT1Q6NXT6 567 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 FOXD4L3Q6VB84 417 aaPredicted RBP13□□□□□ -0.33
CAPN1-217ENST00000529133 SEPT14Q6ZU15 432 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 NLRX1Q86UT6 975 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 PLA2G4DQ86XP0 818 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 WDR11Q9BZH6 1224 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 FTOQ9C0B1 505 aaKnown RBP eCLIP13□□□□□ -0.33
CAPN1-217ENST00000529133 ABHD16BQ9H3Z7 469 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 EIF4ENIF1Q9NRA8 985 aaKnown RBP13□□□□□ -0.33
CAPN1-217ENST00000529133 NRBP1Q9UHY1 535 aa13□□□□□ -0.33
CAPN1-217ENST00000529133 ZHX1Q9UKY1 873 aaPredicted RBP13□□□□□ -0.33
CAPN1-217ENST00000529133 RBM47A0AV96 593 aaKnown RBP12.99□□□□□ -0.33
CAPN1-217ENST00000529133 SPATA31C2B4DYI2 1134 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 FIBPO43427 364 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 NEMFO60524 1076 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 INHAP05111 366 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 ARP10275 920 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 CYBAP13498 195 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 PRKAR2AP13861 404 aaKnown RBP12.99□□□□□ -0.33
CAPN1-217ENST00000529133 GRK4P32298 578 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 ICAM3P32942 547 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 CACNB2Q08289 660 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-217ENST00000529133 MTMR1Q13613 665 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 MAP3K21Q5TCX8 1036 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
CAPN1-217ENST00000529133 TRPV1Q8NER1 839 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms