RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 MAP3K10Q02779 954 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 EVX2Q03828 476 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 PICALMQ13492 652 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 NCAPHQ15003 741 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 NPY5RQ15761 445 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 ISM2Q6H9L7 571 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 TMC6Q7Z403 805 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 STAG2Q8N3U4 1231 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 CCDC112Q8NEF3 446 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 CCDC47Q96A33 483 aaKnown RBP13.25□□□□□ -0.29
USF1-208ENST00000528768 XPO4Q9C0E2 1151 aaKnown RBP13.25□□□□□ -0.29
USF1-208ENST00000528768 DHX36Q9H2U1 1008 aaKnown RBP13.25□□□□□ -0.29
USF1-208ENST00000528768 NRBP1Q9UHY1 535 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 SERPINB13Q9UIV8 391 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 GJD2Q9UKL4 321 aa13.25□□□□□ -0.29
USF1-208ENST00000528768 ATRNL1Q5VV63 1379 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 A0A087WWV3 80 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 ESYT2A0FGR8 921 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 FAM205CA6NFA0 338 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 STXBP3O00186 592 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 DYNC1I1O14576 645 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 GTPBP6O43824 516 aaPredicted RBP13.24□□□□□ -0.29
USF1-208ENST00000528768 TTLL1O95922 423 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 MYL1P05976 194 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 SKILP12757 684 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 GRIN1Q05586 938 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 NFIAQ12857 509 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 NONOQ15233 471 aaKnown RBP eCLIP13.24□□□□□ -0.29
USF1-208ENST00000528768 TPD52L1Q16890 204 aaPredicted RBP13.24□□□□□ -0.29
USF1-208ENST00000528768 WWC2Q6AWC2 1192 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 PPP1R18Q6NYC8 613 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 RASSF8Q8NHQ8 419 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 SPATA20Q8TB22 786 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 CACTINQ8WUQ7 758 aaKnown RBP13.24□□□□□ -0.29
USF1-208ENST00000528768 SOCS4Q8WXH5 440 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 GPKOWQ92917 476 aaPredicted RBP eCLIP13.24□□□□□ -0.29
USF1-208ENST00000528768 CEP95Q96GE4 821 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 PAGE5Q96GU1 130 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 AK8Q96MA6 479 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 CDX2Q99626 313 aaPredicted RBP13.24□□□□□ -0.29
USF1-208ENST00000528768 IDI2Q9BXS1 227 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 ZMYND12Q9H0C1 365 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 GLT8D2Q9H1C3 349 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 EHD4Q9H223 541 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 CUEDC2Q9H467 287 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 MAGEF1Q9HAY2 307 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 MTMR4Q9NYA4 1195 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 FAM198AQ9UFP1 575 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 PCDHA6Q9UN73 950 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 MTMR7Q9Y216 660 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 PCDHA8Q9Y5H6 950 aa13.24□□□□□ -0.29
USF1-208ENST00000528768 SPTBN5Q9NRC6 3674 aaKnown RBP13.24□□□□□ -0.29
USF1-208ENST00000528768 UQCRHLA0A096LP55 91 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 SMCO2A6NFE2 343 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 UQCRHP07919 91 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
USF1-208ENST00000528768 COL9A1P20849 921 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 KCNJ6P48051 423 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 FILIP1LQ4L180 1135 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 EARS2Q5JPH6 523 aaKnown RBP13.23□□□□□ -0.29
USF1-208ENST00000528768 GPATCH4Q5T3I0 446 aaKnown RBP13.23□□□□□ -0.29
USF1-208ENST00000528768 ANKRD20A12PQ8NF67 263 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 EPSTI1Q96J88 318 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 CTAGE1Q96RT6 745 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 NAP1L4Q99733 375 aaKnown RBP13.23□□□□□ -0.29
USF1-208ENST00000528768 PRKAG2Q9UGJ0 569 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 DOCK3Q8IZD9 2030 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 MYH1P12882 1939 aa13.23□□□□□ -0.29
USF1-208ENST00000528768 PTPRFP10586 1907 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
USF1-208ENST00000528768 UBA7P41226 1012 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 STAT6P42226 847 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 AFMP43652 599 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 GABPAQ06546 454 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 CCDC144BQ3MJ40 725 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 FOXP4Q8IVH2 680 aaPredicted RBP13.22□□□□□ -0.29
USF1-208ENST00000528768 TRIB2Q92519 343 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 NUDT12Q9BQG2 462 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 SEMA6BQ9H3T3 888 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 RIOX1Q9H6W3 641 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 KCND1Q9NSA2 647 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 MORF4L1Q9UBU8 362 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 PAXBP1Q9Y5B6 917 aa13.22□□□□□ -0.29
USF1-208ENST00000528768 LAMA2P24043 3122 aaKnown RBP13.22□□□□□ -0.29
USF1-208ENST00000528768 TMEM265A0A087WTH1 108 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 M0R2N6 131 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 TBC1D12O60347 775 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 PRR29P0C7W0 189 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 GOLGA8HP0CJ92 632 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 HOXA7P31268 230 aaPredicted RBP13.21□□□□□ -0.29
USF1-208ENST00000528768 PPP1R2P41236 205 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 ADCY7P51828 1080 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 SPAG1Q07617 926 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 DPYDQ12882 1025 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 LRMPQ12912 555 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 STIM1Q13586 685 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 LRRC26Q2I0M4 334 aa13.21□□□□□ -0.29
USF1-208ENST00000528768 SPATA1Q5VX52 437 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms