RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 PYM1Q9BRP8 204 aaKnown RBP8.66□□□□□ -1.02
SOX6-211ENST00000528429 AS3MTQ9HBK9 375 aa8.66□□□□□ -1.02
SOX6-211ENST00000528429 RAVER2Q9HCJ3 691 aaKnown RBP8.66□□□□□ -1.02
SOX6-211ENST00000528429 EMILIN3Q9NT22 766 aa8.66□□□□□ -1.02
SOX6-211ENST00000528429 GCOM1H8Y6P7 765 aaPredicted RBP8.65□□□□□ -1.02
SOX6-211ENST00000528429 KIF4AO95239 1232 aa8.65□□□□□ -1.02
SOX6-211ENST00000528429 FOSP01100 380 aaPredicted RBP8.65□□□□□ -1.02
SOX6-211ENST00000528429 POLR2MP0CAP2 368 aa8.65□□□□□ -1.02
SOX6-211ENST00000528429 ALAS1P13196 640 aa8.65□□□□□ -1.02
SOX6-211ENST00000528429 GCFC2P16383 781 aaKnown RBP8.65□□□□□ -1.02
SOX6-211ENST00000528429 USP14P54578 494 aa8.65□□□□□ -1.02
SOX6-211ENST00000528429 BACE1P56817 501 aa8.65□□□□□ -1.02
SOX6-211ENST00000528429 ORC2Q13416 577 aaPredicted RBP8.65□□□□□ -1.02
SOX6-211ENST00000528429 EAPPQ56P03 285 aaPredicted RBP8.65□□□□□ -1.02
SOX6-211ENST00000528429 SH3RF1Q7Z6J0 888 aa8.65□□□□□ -1.02
SOX6-211ENST00000528429 TRMT44Q8IYL2 757 aaKnown RBP8.65□□□□□ -1.02
SOX6-211ENST00000528429 RAB34Q9BZG1 259 aa8.65□□□□□ -1.02
SOX6-211ENST00000528429 CCSER1Q9C0I3 900 aa8.65□□□□□ -1.02
SOX6-211ENST00000528429 PCDHA12Q9UN75 941 aa8.65□□□□□ -1.02
SOX6-211ENST00000528429 MRPL11Q9Y3B7 192 aaKnown RBP8.65□□□□□ -1.02
SOX6-211ENST00000528429 OFD1O75665 1012 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 SARSP49591 514 aaKnown RBP8.65□□□□□ -1.03
SOX6-211ENST00000528429 TPM4P67936 248 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 DPYDQ12882 1025 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 NAALADL2Q58DX5 795 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.65□□□□□ -1.03
SOX6-211ENST00000528429 ELOA2Q8IYF1 753 aaPredicted RBP8.65□□□□□ -1.03
SOX6-211ENST00000528429 IGSF22Q8N9C0 903 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 SNX29Q8TEQ0 813 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 HAS1Q92839 578 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 CALML4Q96GE6 196 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 CCDC94Q9BW85 323 aaPredicted RBP8.65□□□□□ -1.03
SOX6-211ENST00000528429 GINM1Q9NU53 330 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 ZNF112Q9UJU3 913 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 PPP2R3BQ9Y5P8 575 aa8.65□□□□□ -1.03
SOX6-211ENST00000528429 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 NFIBO00712 420 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 RIOK3O14730 519 aaKnown RBP8.64□□□□□ -1.03
SOX6-211ENST00000528429 PLA2G6O60733 806 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 SREBF1P36956 1147 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 USP11P51784 963 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 ZNF75DP51815 510 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 MYL5Q02045 173 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 MORC3Q14149 939 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 TTLL12Q14166 644 aaPredicted RBP8.64□□□□□ -1.03
SOX6-211ENST00000528429 NT5DC1Q5TFE4 455 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 MTERF4Q7Z6M4 381 aaKnown RBP8.64□□□□□ -1.03
SOX6-211ENST00000528429 CYP2W1Q8TAV3 490 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 LRRC15Q8TF66 581 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 MMTAG2Q9BU76 263 aaKnown RBP8.64□□□□□ -1.03
SOX6-211ENST00000528429 PNMA2Q9UL42 364 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 SMTNL1A8MU46 457 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 FAM86B1E9PN63 330 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 GTPBP6O43824 516 aaPredicted RBP8.64□□□□□ -1.03
SOX6-211ENST00000528429 PPP1R12BO60237 982 aaPredicted RBP8.64□□□□□ -1.03
SOX6-211ENST00000528429 ICAM1P05362 532 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 FAM86B2P0C5J1 330 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 CCDC172P0C7W6 258 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 STAT3P40763 770 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 FXR2P51116 673 aaKnown RBP eCLIP8.64□□□□□ -1.03
SOX6-211ENST00000528429 STX17P56962 302 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 ZC3H12AQ5D1E8 599 aaKnown RBP8.64□□□□□ -1.03
SOX6-211ENST00000528429 C1QTNF12Q5T7M4 302 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 KRT79Q5XKE5 535 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 MLKLQ8NB16 471 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 ATG4CQ96DT6 458 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 WNK4Q96J92 1243 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 GSDMAQ96QA5 445 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 NAP1L4Q99733 375 aaKnown RBP8.64□□□□□ -1.03
SOX6-211ENST00000528429 NUDT12Q9BQG2 462 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 PPP1R9AQ9ULJ8 1098 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 MAPK8IP1Q9UQF2 711 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 SSC5DA1L4H1 1573 aa8.64□□□□□ -1.03
SOX6-211ENST00000528429 COBLO75128 1261 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 PPFIA4O75335 1185 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 USP2O75604 605 aaPredicted RBP8.63□□□□□ -1.03
SOX6-211ENST00000528429 ATP1A3P13637 1013 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 EPHX2P34913 555 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 FMR1Q06787 632 aaKnown RBP eCLIP8.63□□□□□ -1.03
SOX6-211ENST00000528429 VGLL4Q14135 290 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 NCAPHQ15003 741 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 MCTP2Q6DN12 878 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 MSL3Q8N5Y2 521 aaKnown RBP8.63□□□□□ -1.03
SOX6-211ENST00000528429 TRIML1Q8N9V2 468 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 SPATA20Q8TB22 786 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 KCNV2Q8TDN2 545 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 BPIFA3Q9BQP9 254 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 WDR18Q9BV38 432 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 DACH1Q9UI36 760 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 CSADQ9Y600 493 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 ZNF536O15090 1300 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 ABCB11O95342 1321 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 PITPNM2Q9BZ72 1349 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 SBF1O95248 1867 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 PIK3CDO00329 1044 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 ZBED4O75132 1171 aa8.63□□□□□ -1.03
SOX6-211ENST00000528429 RPN1P04843 607 aaKnown RBP8.63□□□□□ -1.03
SOX6-211ENST00000528429 SSBP05455 408 aaKnown RBP eCLIP8.63□□□□□ -1.03
SOX6-211ENST00000528429 CCT6AP40227 531 aaKnown RBP8.63□□□□□ -1.03
SOX6-211ENST00000528429 NSMFQ6X4W1 530 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms