RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 NCOA5Q9HCD5 579 aaKnown RBP15.37■□□□□ 0.05
CAPN1-215ENST00000528396 PRDM5Q9NQX1 630 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-215ENST00000528396 FAM217BQ9NTX9 383 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-215ENST00000528396 POLR3EQ9NVU0 708 aa15.37■□□□□ 0.05
CAPN1-215ENST00000528396 NID2Q14112 1375 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 MEIS2O14770 477 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 PQBP1O60828 265 aaKnown RBP15.36■□□□□ 0.05
CAPN1-215ENST00000528396 STAM2O75886 525 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 SEC24BO95487 1268 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 GH1P01241 217 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 MYL3P08590 195 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 SCG2P13521 617 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 EVCP57679 992 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 IRX5P78411 483 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-215ENST00000528396 UBE2SQ16763 222 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 PFKFB3Q16875 520 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-215ENST00000528396 TRIM60Q495X7 471 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 TMEM63BQ5T3F8 832 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 XRRA1Q6P2D8 792 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 CXCL17Q6UXB2 119 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 BARHL2Q9NY43 387 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 ELP1O95163 1332 aa15.36■□□□□ 0.05
CAPN1-215ENST00000528396 A0A0U1RQG5 324 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-215ENST00000528396 SMCO2A6NFE2 343 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 DCDC2CA8MYV0 355 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 STXBP3O00186 592 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 PRPF3O43395 683 aaKnown RBP15.35■□□□□ 0.05
CAPN1-215ENST00000528396 PPFIA3O75145 1194 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 CDKL5O76039 1030 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 IFNAR1P17181 557 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 SYN1P17600 705 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 PTGS1P23219 599 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 NEK4P51957 841 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
CAPN1-215ENST00000528396 LY6KQ17RY6 165 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 CCSAPQ6IQ19 270 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-215ENST00000528396 TEX2Q8IWB9 1127 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 IL31RAQ8NI17 732 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 LBHD1Q9BQE6 289 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-215ENST00000528396 RNF26Q9BY78 433 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-215ENST00000528396 SLKQ9H2G2 1235 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-215ENST00000528396 RIC8AQ9NPQ8 531 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 MROH7Q68CQ1 1323 aa15.35■□□□□ 0.05
CAPN1-215ENST00000528396 KPNA6O60684 536 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 ARIH2O95376 493 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 NKX3-2P78367 333 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 TLE2Q04725 743 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 SNX17Q15036 470 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 C8orf34Q49A92 452 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 C1orf53Q5VUE5 145 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 PCNX4Q63HM2 1172 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 CHRDL2Q6WN34 429 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 NLRX1Q86UT6 975 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 DHX37Q8IY37 1157 aaKnown RBP15.34■□□□□ 0.05
CAPN1-215ENST00000528396 CCDC148Q8NFR7 591 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 COPS5Q92905 334 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 ZFP91Q96JP5 570 aaPredicted RBP15.34■□□□□ 0.05
CAPN1-215ENST00000528396 C6orf50Q9HD87 102 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 RTEL1Q9NZ71 1219 aa15.34■□□□□ 0.05
CAPN1-215ENST00000528396 DDX41Q9UJV9 622 aaKnown RBP15.34■□□□□ 0.05
CAPN1-215ENST00000528396 ALPK3Q96L96 1907 aa15.33■□□□□ 0.05
CAPN1-215ENST00000528396 CTAGE5O15320 804 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 TLR3O15455 904 aaKnown RBP15.33■□□□□ 0.04
CAPN1-215ENST00000528396 FOSP01100 380 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-215ENST00000528396 TGFB3P10600 412 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 GNA11P29992 359 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 AK2P54819 239 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 CHMP4BP1P59074 171 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 LAMC2Q13753 1193 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 CCDC62Q6P9F0 684 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 BICD2Q8TD16 824 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 MTG1Q9BT17 334 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-215ENST00000528396 ALDH8A1Q9H2A2 487 aaPredicted RBP15.33■□□□□ 0.04
CAPN1-215ENST00000528396 MLXIPQ9HAP2 919 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 PCDHA6Q9UN73 950 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 PCDHA8Q9Y5H6 950 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 FRMPD4Q14CM0 1322 aa15.33■□□□□ 0.04
CAPN1-215ENST00000528396 A6NJR5 290 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 ARVCFO00192 962 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 FIBPO43427 364 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 SORBS3O60504 671 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 CLTBP09497 229 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 NTRK3Q16288 839 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 AFG1LQ8WV93 481 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 CDHR1Q96JP9 859 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 SEZ6LQ9BYH1 1024 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 C22orf23Q9BZE7 217 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 TMEM39AQ9NV64 488 aa15.32■□□□□ 0.04
CAPN1-215ENST00000528396 NOP56O00567 594 aaKnown RBP15.31■□□□□ 0.04
CAPN1-215ENST00000528396 DEXIO95424 95 aa15.31■□□□□ 0.04
CAPN1-215ENST00000528396 GGPS1O95749 300 aa15.31■□□□□ 0.04
CAPN1-215ENST00000528396 UBA1P22314 1058 aaKnown RBP15.31■□□□□ 0.04
CAPN1-215ENST00000528396 ZNF76P36508 570 aa15.31■□□□□ 0.04
CAPN1-215ENST00000528396 MRPS9P82933 396 aaKnown RBP15.31■□□□□ 0.04
CAPN1-215ENST00000528396 PURAQ00577 322 aaKnown RBP15.31■□□□□ 0.04
CAPN1-215ENST00000528396 ARHGAP1Q07960 439 aa15.31■□□□□ 0.04
CAPN1-215ENST00000528396 AP3B2Q13367 1082 aa15.31■□□□□ 0.04
CAPN1-215ENST00000528396 ITGA7Q13683 1181 aa15.31■□□□□ 0.04
CAPN1-215ENST00000528396 NEDD9Q14511 834 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms