RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 NPHP3-ACAD11A0A0J9YXS1 232 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 SMIM23A6NLE4 172 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 PALMO75781 387 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 TDP2O95551 362 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 NTSR2O95665 410 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 ODF2Q5BJF6 829 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 CFAP58Q5T655 872 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 HAUS3Q68CZ6 603 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 SPTY2D1Q68D10 685 aaPredicted RBP10.91□□□□□ -0.66
SF3B2-206ENST00000528302 NOC3LQ8WTT2 800 aaKnown RBP10.91□□□□□ -0.66
SF3B2-206ENST00000528302 SPEF2Q9C093 1822 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 MYMKA6NI61 221 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 OR52Z1P0C646 297 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 MCM3P25205 808 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
SF3B2-206ENST00000528302 LLGL1Q15334 1064 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 SOGA3Q5TF21 947 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 TRIM58Q8NG06 486 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 TBC1D5Q92609 795 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 RNPC3Q96LT9 517 aaKnown RBP10.91□□□□□ -0.66
SF3B2-206ENST00000528302 PIGSQ96S52 555 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 SH2D4AQ9H788 454 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 GPCPD1Q9NPB8 672 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 STIM2Q9P246 746 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 ANKIB1Q9P2G1 1089 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 COL4A1P02462 1669 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 STRCQ7RTU9 1775 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 UBR2Q8IWV8 1755 aa10.91□□□□□ -0.66
SF3B2-206ENST00000528302 TMCO5BA8MYB1 307 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 F8W031 263 aaPredicted RBP10.9□□□□□ -0.66
SF3B2-206ENST00000528302 RHOBTB3O94955 611 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 FECHP22830 423 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 HIBADHP31937 336 aaKnown RBP10.9□□□□□ -0.66
SF3B2-206ENST00000528302 UBE2SQ16763 222 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 CEP85LQ5SZL2 805 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 IQCEQ6IPM2 695 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 NBPF5PQ86XG9 351 aaPredicted RBP10.9□□□□□ -0.66
SF3B2-206ENST00000528302 LRRC47Q8N1G4 583 aaKnown RBP10.9□□□□□ -0.66
SF3B2-206ENST00000528302 FAM133AQ8N9E0 248 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.9□□□□□ -0.662e-6■■■■■ 40.3
SF3B2-206ENST00000528302 IFT88Q13099 833 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 PPFIA1Q13136 1202 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 VWA3BQ502W6 1294 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 KCNK18Q7Z418 384 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 OTUD6BQ8N6M0 293 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 AENQ8WTP8 325 aaKnown RBP10.9□□□□□ -0.66
SF3B2-206ENST00000528302 CALML4Q96GE6 196 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 LSM14BQ9BX40 385 aaKnown RBP10.9□□□□□ -0.66
SF3B2-206ENST00000528302 FGFBP2Q9BYJ0 223 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 KBTBD4Q9NVX7 518 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 BCS1LQ9Y276 419 aa10.9□□□□□ -0.66
SF3B2-206ENST00000528302 COL1A1P02452 1464 aaPredicted RBP10.9□□□□□ -0.66
SF3B2-206ENST00000528302 A0A1W2PQC6 194 aa10.9□□□□□ -0.67
SF3B2-206ENST00000528302 ERVV-1B6SEH8 477 aa10.9□□□□□ -0.67
SF3B2-206ENST00000528302 E7EVH7 732 aa10.9□□□□□ -0.67
SF3B2-206ENST00000528302 KIAA0754O94854 1291 aa10.9□□□□□ -0.67
SF3B2-206ENST00000528302 EPS15P42566 896 aa10.9□□□□□ -0.67
SF3B2-206ENST00000528302 AARSP49588 968 aaKnown RBP eCLIP10.9□□□□□ -0.67
SF3B2-206ENST00000528302 UHMK1Q8TAS1 419 aaKnown RBP10.9□□□□□ -0.67
SF3B2-206ENST00000528302 SNX29Q8TEQ0 813 aa10.9□□□□□ -0.67
SF3B2-206ENST00000528302 ZNF622Q969S3 477 aaKnown RBP eCLIP10.9□□□□□ -0.672e-10■■□□□ 12.2
SF3B2-206ENST00000528302 TMEM47Q9BQJ4 181 aa10.9□□□□□ -0.67
SF3B2-206ENST00000528302 TTYH3Q9C0H2 523 aa10.9□□□□□ -0.67
SF3B2-206ENST00000528302 SPATA31A1Q5TZJ5 1347 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 BICDL2A1A5D9 508 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 KCNK3O14649 394 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 EIF3HO15372 352 aaKnown RBP eCLIP10.89□□□□□ -0.671e-7■□□□□ 10.9
SF3B2-206ENST00000528302 ECM2O94769 699 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 ACTN1P12814 892 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 KLRC1P26715 233 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 TMOD1P28289 359 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 PICALMQ13492 652 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 PPP2R5BQ15173 497 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 KIAA0753Q2KHM9 967 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 PPP4R3CPQ6ZMV5 832 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 SV2BQ7L1I2 683 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 BRIP1Q9BX63 1249 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 TLR10Q9BXR5 811 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 MAD2L2Q9UI95 211 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 SLC37A4O43826 429 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 TUBBP07437 444 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 MEA1Q16626 185 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 CT47A1Q5JQC4 288 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 TCERG1LQ5VWI1 586 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 ARL6IP4Q66PJ3 421 aaKnown RBP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 TRMT1LQ7Z2T5 733 aaKnown RBP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 EFCAB13Q8IY85 973 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 JPH2Q9BR39 696 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 EFCC1Q9HA90 598 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 ANAPC4Q9UJX5 808 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 A0A087WUV0 522 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 STXBP3O00186 592 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 HGSO14964 777 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 PRPF4BQ13523 1007 aaKnown RBP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 NONOQ15233 471 aaKnown RBP eCLIP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 DHTKD1Q96HY7 919 aaPredicted RBP10.89□□□□□ -0.67
SF3B2-206ENST00000528302 NOX5Q96PH1 765 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 NUP58Q9BVL2 599 aa10.89□□□□□ -0.67
SF3B2-206ENST00000528302 VIPAS39Q9H9C1 493 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms