RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 SMYD4Q8IYR2 804 aaPredicted RBP16.63■□□□□ 0.25
USP47-207ENST00000527733 RBM46Q8TBY0 533 aaKnown RBP16.63■□□□□ 0.25
USP47-207ENST00000527733 SENP2Q9HC62 589 aa16.63■□□□□ 0.25
USP47-207ENST00000527733 TMEM110-MUSTN1A8MSY1 372 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 HOXA7P31268 230 aaPredicted RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 MAGEA1P43355 309 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 SPDYE4A6NLX3 237 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 SLU7O95391 586 aaKnown RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 PSAPP07602 524 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 PDHBP11177 359 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 CLEC17AQ6ZS10 378 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 LDHDQ86WU2 507 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 HACE1Q8IYU2 909 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 EEF2KMTQ96G04 330 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 ADPGKQ9BRR6 497 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 RPAP3Q9H6T3 665 aaPredicted RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 MRC1P22897 1456 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 WDR46O15213 610 aaKnown RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 C11orf57Q6ZUT1 292 aaPredicted RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 VCPKMTQ9H867 229 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 KIF28PB7ZC32 967 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 N4BP1O75113 896 aaKnown RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 IGBP1P78318 339 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 FKBP3Q00688 224 aaKnown RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 MTMR1Q13613 665 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 STXBP2Q15833 593 aa16.62■□□□□ 0.25
USP47-207ENST00000527733 RNF216Q9NWF9 866 aaPredicted RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 ZHX1Q9UKY1 873 aaPredicted RBP16.62■□□□□ 0.25
USP47-207ENST00000527733 STAT3P40763 770 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 NFIAQ12857 509 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 PSMD2Q13200 908 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 GBP6Q6ZN66 633 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 AP5M1Q9H0R1 490 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 BHMT2Q9H2M3 363 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 KRT19P08727 400 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 USP11P51784 963 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 MAP3K9P80192 1104 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 PPP2R3AQ06190 1150 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 MTMR2Q13614 643 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 PDXDC2PQ6P474 469 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 RGPD8O14715 1765 aaPredicted RBP16.61■□□□□ 0.25
USP47-207ENST00000527733 HNRNPDLO14979 420 aaKnown RBP16.61■□□□□ 0.25
USP47-207ENST00000527733 NR2F2P24468 414 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 EEF1GP26641 437 aaKnown RBP16.61■□□□□ 0.25
USP47-207ENST00000527733 GJC1P36383 396 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 ADKP55263 362 aaKnown RBP16.61■□□□□ 0.25
USP47-207ENST00000527733 IFFO1Q0D2I5 559 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 TFDP1Q14186 410 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 LRRC41Q15345 812 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 LRP10Q7Z4F1 713 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 EXOC8Q8IYI6 725 aa16.61■□□□□ 0.25
USP47-207ENST00000527733 ENOX1Q8TC92 643 aaKnown RBP16.61■□□□□ 0.25
USP47-207ENST00000527733 LSM14BQ9BX40 385 aaKnown RBP16.61■□□□□ 0.25
USP47-207ENST00000527733 A0A087WWV3 80 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 POTEMA6NI47 508 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 C19orf81C9J6K1 198 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 U2AF2P26368 475 aaKnown RBP eCLIP16.6■□□□□ 0.258e-8■■□□□ 12.3
USP47-207ENST00000527733 TM4SF1P30408 202 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 MMP14P50281 582 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 COPB1P53618 953 aaKnown RBP16.6■□□□□ 0.25
USP47-207ENST00000527733 SLC8A3P57103 927 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 TROAPQ12815 778 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 CNOT6LQ96LI5 555 aaKnown RBP16.6■□□□□ 0.25
USP47-207ENST00000527733 TUBGCP2Q9BSJ2 902 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 PARVGQ9HBI0 331 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 TBC1D22BQ9NU19 505 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 TCRBV5S4A2TA0A5A2 114 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 CXCL9Q07325 125 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 COG2Q14746 738 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 FASTKD5Q7L8L6 764 aaKnown RBP16.6■□□□□ 0.25
USP47-207ENST00000527733 TAX1BP1Q86VP1 789 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 PHF20Q9BVI0 1012 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 ACAD9Q9H845 621 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 CTTNQ14247 550 aaKnown RBP16.6■□□□□ 0.25
USP47-207ENST00000527733 ARHGAP44Q17R89 818 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 ADGRA1Q86SQ6 560 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 POMGNT1Q8WZA1 660 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 NOX5Q96PH1 765 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 PEAK1Q9H792 1746 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 CCNE1P24864 410 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 SMARCA1P28370 1054 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 GBP2P32456 591 aaPredicted RBP16.6■□□□□ 0.25
USP47-207ENST00000527733 CA8P35219 290 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 STAT1P42224 750 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 JAKMIP2Q96AA8 810 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 CCDC127Q96BQ5 260 aa16.6■□□□□ 0.25
USP47-207ENST00000527733 ZFP91Q96JP5 570 aaPredicted RBP16.6■□□□□ 0.25
USP47-207ENST00000527733 JAK3P52333 1124 aa16.59■□□□□ 0.25
USP47-207ENST00000527733 TUBB4BP68371 445 aa16.59■□□□□ 0.25
USP47-207ENST00000527733 RETREG2Q8NC44 543 aa16.59■□□□□ 0.25
USP47-207ENST00000527733 SPDYE2BA6NHP3 402 aa16.59■□□□□ 0.25
USP47-207ENST00000527733 SPDYE6P0CI01 402 aa16.59■□□□□ 0.25
USP47-207ENST00000527733 FMR1NBQ8N0W7 255 aaPredicted RBP16.59■□□□□ 0.25
USP47-207ENST00000527733 KMT5AQ9NQR1 393 aa16.59■□□□□ 0.25
USP47-207ENST00000527733 EMILIN3Q9NT22 766 aa16.59■□□□□ 0.25
USP47-207ENST00000527733 LTN1O94822 1766 aa16.59■□□□□ 0.25
USP47-207ENST00000527733 ATP2C1P98194 919 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms