RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, human

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD13-206	ENST00000527047	ANKRD35	Q8N283	1001 aa		13.57	□□□□□ -0.24
PSMD13-206	ENST00000527047	COL20A1	Q9P218	1284 aa		13.57	□□□□□ -0.24
PSMD13-206	ENST00000527047	DIS3	Q9Y2L1	958 aa	Known RBP	13.57	□□□□□ -0.24
PSMD13-206	ENST00000527047	TRIM17	Q9Y577	477 aa		13.57	□□□□□ -0.24
PSMD13-206	ENST00000527047	ASTN1	O14525	1302 aa		13.57	□□□□□ -0.24
PSMD13-206	ENST00000527047	RGS2	P41220	211 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	CNTN2	Q02246	1040 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	NPY5R	Q15761	445 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	NPLOC4	Q8TAT6	608 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	DDX11	Q96FC9	970 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	INTS4	Q96HW7	963 aa	Known RBP	13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	ZFR	Q96KR1	1074 aa	Known RBP	13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	APBA2	Q99767	749 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	PSTPIP2	Q9H939	334 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	CWC22	Q9HCG8	908 aa	Known RBP	13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	RIC8A	Q9NPQ8	531 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	VPS54	Q9P1Q0	977 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	PTPN22	Q9Y2R2	807 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	LRRC37A2	A6NM11	1700 aa		13.56	□□□□□ -0.24
PSMD13-206	ENST00000527047	SOWAHB	A6NEL2	793 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	SMCO2	A6NFE2	343 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	C3orf80	F5H4A9	247 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	GCOM1	H8Y6P7	765 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	ADAMTS3	O15072	1205 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	CFB	P00751	764 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	POLR2M	P0CAP2	368 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	CLK2	P49760	499 aa	Known RBP	13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	DPP9	Q86TI2	863 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	LAPTM4B	Q86VI4	370 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	HSCB	Q8IWL3	235 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	CCDC148	Q8NFR7	591 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	WASF1	Q92558	559 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	MAML3	Q96JK9	1138 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	PURB	Q96QR8	312 aa	Known RBP	13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	ALG1	Q9BT22	464 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	GJB4	Q9NTQ9	266 aa		13.55	□□□□□ -0.24
PSMD13-206	ENST00000527047	CYP2B6	P20813	491 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	CALML3	P27482	149 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	HOXA13	P31271	388 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	MLLT3	P42568	568 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	ADCY7	P51828	1080 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	MRPL12	P52815	198 aa	Known RBP	13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	PKN2	Q16513	984 aa	Known RBP	13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	CCL14	Q16627	93 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	OLFML2B	Q68BL8	750 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	USP17L6P	Q6QN14	398 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	MAMDC4	Q6UXC1	1216 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	DAGLB	Q8NCG7	672 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	ANKK1	Q8NFD2	765 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	DNER	Q8NFT8	737 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	MORC4	Q8TE76	937 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	PXYLP1	Q8TE99	480 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	CUL5	Q93034	780 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	PHF20	Q9BVI0	1012 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	GLT8D2	Q9H1C3	349 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	SLC5A4	Q9NY91	659 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	FLRT1	Q9NZU1	646 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	PTCH2	Q9Y6C5	1203 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	FRMPD4	Q14CM0	1322 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	HTT	P42858	3142 aa		13.54	□□□□□ -0.24
PSMD13-206	ENST00000527047	MYH7B	A7E2Y1	1941 aa		13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047	LOC102724159	A0A0B4J2E5	919 aa		13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047		M0R2N6	131 aa		13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047	PWP2	Q15269	919 aa	Known RBP	13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047	GALNT17	Q6IS24	598 aa		13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047	MSL3	Q8N5Y2	521 aa	Known RBP	13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047	TRIB2	Q92519	343 aa		13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047	TAAR1	Q96RJ0	339 aa		13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047	C6orf50	Q9HD87	102 aa		13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047	RPTOR	Q8N122	1335 aa		13.53	□□□□□ -0.24
PSMD13-206	ENST00000527047	ADCY3	O60266	1144 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	XBP1	P17861	261 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	EDNRB	P24530	442 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	GJB2	P29033	226 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	GNA11	P29992	359 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	ALDH5A1	P51649	535 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	PLCB2	Q00722	1185 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	UBE2S	Q16763	222 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	TRMT44	Q8IYL2	757 aa	Known RBP	13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	RAET1E	Q8TD07	263 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	ADD3	Q9UEY8	706 aa	Known RBP	13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	PCDHA4	Q9UN74	947 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	KCNJ14	Q9UNX9	436 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	SMC3	Q9UQE7	1217 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	KIAA1217	Q5T5P2	1943 aa		13.52	□□□□□ -0.25
PSMD13-206	ENST00000527047	SYNGAP1	Q96PV0	1343 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	SMAP	O00193	183 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	MMP1	P03956	469 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	ELN	P15502	786 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	PRSS12	P56730	875 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	NLRP5	P59047	1200 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	MAP3K21	Q5TCX8	1036 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	KRT40	Q6A162	431 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	FCHSD1	Q86WN1	690 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	BLID	Q8IZY5	108 aa		13.51	□□□□□ -0.25
PSMD13-206	ENST00000527047	REXO1	Q8N1G1	1221 aa	Known RBP	13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms