RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 GDF6Q6KF10 455 aaPredicted RBP21.9■■□□□ 1.1
CAPN1-206ENST00000526966 SEPT14Q6ZU15 432 aa21.9■■□□□ 1.1
CAPN1-206ENST00000526966 PLEKHM2Q8IWE5 1019 aa21.9■■□□□ 1.1
CAPN1-206ENST00000526966 ENAHQ8N8S7 591 aaPredicted RBP21.9■■□□□ 1.1
CAPN1-206ENST00000526966 IL27Q8NEV9 243 aa21.9■■□□□ 1.1
CAPN1-206ENST00000526966 ZSCAN10Q96SZ4 725 aaPredicted RBP21.9■■□□□ 1.1
CAPN1-206ENST00000526966 RMDN3Q96TC7 470 aa21.9■■□□□ 1.1
CAPN1-206ENST00000526966 B4E1Z4 1266 aa21.89■■□□□ 1.09
CAPN1-206ENST00000526966 BMP1P13497 986 aa21.89■■□□□ 1.09
CAPN1-206ENST00000526966 GPNMBQ14956 572 aa21.89■■□□□ 1.09
CAPN1-206ENST00000526966 STXBP2Q15833 593 aa21.89■■□□□ 1.09
CAPN1-206ENST00000526966 DHX38Q92620 1227 aaKnown RBP21.89■■□□□ 1.09
CAPN1-206ENST00000526966 EMID1Q96A84 441 aaPredicted RBP21.89■■□□□ 1.09
CAPN1-206ENST00000526966 CERS4Q9HA82 394 aa21.89■■□□□ 1.09
CAPN1-206ENST00000526966 GTPBP6O43824 516 aaPredicted RBP21.88■■□□□ 1.09
CAPN1-206ENST00000526966 CASTP20810 708 aaKnown RBP21.88■■□□□ 1.09
CAPN1-206ENST00000526966 COL9A1P20849 921 aa21.88■■□□□ 1.09
CAPN1-206ENST00000526966 GHRHRQ02643 423 aa21.88■■□□□ 1.09
CAPN1-206ENST00000526966 TFF2Q03403 129 aa21.88■■□□□ 1.09
CAPN1-206ENST00000526966 CWC27Q6UX04 472 aaKnown RBP21.88■■□□□ 1.09
CAPN1-206ENST00000526966 FBXO11Q86XK2 927 aa21.88■■□□□ 1.09
CAPN1-206ENST00000526966 DSCC1Q9BVC3 393 aa21.88■■□□□ 1.09
CAPN1-206ENST00000526966 JMJD4Q9H9V9 463 aa21.88■■□□□ 1.09
CAPN1-206ENST00000526966 ZSWIM5Q9P217 1185 aa21.88■■□□□ 1.09
CAPN1-206ENST00000526966 GTF2IRD1Q9UHL9 959 aa21.88■■□□□ 1.09
CAPN1-206ENST00000526966 DDX41Q9UJV9 622 aaKnown RBP21.88■■□□□ 1.09
CAPN1-206ENST00000526966 MRPL11Q9Y3B7 192 aaKnown RBP21.88■■□□□ 1.09
CAPN1-206ENST00000526966 KIF28PB7ZC32 967 aa21.87■■□□□ 1.09
CAPN1-206ENST00000526966 PARP1P09874 1014 aaKnown RBP21.87■■□□□ 1.09
CAPN1-206ENST00000526966 SELPP16109 830 aa21.87■■□□□ 1.09
CAPN1-206ENST00000526966 CHMP4BP1P59074 171 aa21.87■■□□□ 1.09
CAPN1-206ENST00000526966 WDR5P61964 334 aaKnown RBP21.87■■□□□ 1.09
CAPN1-206ENST00000526966 AAK1Q2M2I8 961 aa21.87■■□□□ 1.09
CAPN1-206ENST00000526966 LRRC8DQ7L1W4 858 aa21.87■■□□□ 1.09
CAPN1-206ENST00000526966 CHD1LQ86WJ1 897 aa21.87■■□□□ 1.09
CAPN1-206ENST00000526966 PXMP2Q9NR77 195 aa21.87■■□□□ 1.09
CAPN1-206ENST00000526966 DIAPH3Q9NSV4 1193 aa21.87■■□□□ 1.09
CAPN1-206ENST00000526966 OPLAHO14841 1288 aa21.86■■□□□ 1.09
CAPN1-206ENST00000526966 EIF3JO75822 258 aaKnown RBP21.86■■□□□ 1.09
CAPN1-206ENST00000526966 PARNO95453 639 aaKnown RBP21.86■■□□□ 1.09
CAPN1-206ENST00000526966 CXCL10P02778 98 aa21.86■■□□□ 1.09
CAPN1-206ENST00000526966 EIF2AK2P19525 551 aaKnown RBP21.86■■□□□ 1.09
CAPN1-206ENST00000526966 HSD17B4P51659 736 aa21.86■■□□□ 1.09
CAPN1-206ENST00000526966 DGKDQ16760 1214 aa21.86■■□□□ 1.09
CAPN1-206ENST00000526966 ARHGEF16Q5VV41 709 aa21.86■■□□□ 1.09
CAPN1-206ENST00000526966 B4GALNT3Q6L9W6 998 aa21.86■■□□□ 1.09
CAPN1-206ENST00000526966 CHST3Q7LGC8 479 aa21.86■■□□□ 1.09
CAPN1-206ENST00000526966 ARNTL2Q8WYA1 636 aa21.86■■□□□ 1.09
CAPN1-206ENST00000526966 SIP14410 1827 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 HAS3O00219 553 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 HIP1O00291 1037 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 F2P00734 622 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 NR3C2P08235 984 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 KCNJ6P48051 423 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 NUCB1Q02818 461 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 IMMTQ16891 758 aaKnown RBP21.85■■□□□ 1.09
CAPN1-206ENST00000526966 KRT40Q6A162 431 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 CNKSR3Q6P9H4 555 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 PPTC7Q8NI37 304 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 NECAB3Q96P71 396 aaPredicted RBP21.85■■□□□ 1.09
CAPN1-206ENST00000526966 RWDD1Q9H446 243 aaPredicted RBP21.85■■□□□ 1.09
CAPN1-206ENST00000526966 HDAC6Q9UBN7 1215 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 MICAL3Q7RTP6 2002 aa21.85■■□□□ 1.09
CAPN1-206ENST00000526966 BAZ2BQ9UIF8 2168 aaKnown RBP21.84■■□□□ 1.09
CAPN1-206ENST00000526966 TLL1O43897 1013 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 DHX16O60231 1041 aaKnown RBP21.84■■□□□ 1.09
CAPN1-206ENST00000526966 LPXNO60711 386 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 NBNO60934 754 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 CKBP12277 381 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 HOXD8P13378 290 aaPredicted RBP21.84■■□□□ 1.09
CAPN1-206ENST00000526966 PSEN2P49810 448 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 KCNQ1P51787 676 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 GRB10Q13322 594 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 LAMC2Q13753 1193 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 SKIV2LQ15477 1246 aaKnown RBP21.84■■□□□ 1.09
CAPN1-206ENST00000526966 SPRED2Q7Z698 418 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 MTMR8Q96EF0 704 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 KATNAL1Q9BW62 490 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 AMNQ9BXJ7 453 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 KRT23Q9C075 422 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 CNNM2Q9H8M5 875 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 COG5Q9UP83 839 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 MRVI1Q9Y6F6 885 aa21.84■■□□□ 1.09
CAPN1-206ENST00000526966 LCHNA4D1U4 455 aa21.83■■□□□ 1.09
CAPN1-206ENST00000526966 CFBP00751 764 aa21.83■■□□□ 1.09
CAPN1-206ENST00000526966 TRIM71Q2Q1W2 868 aaKnown RBP21.83■■□□□ 1.09
CAPN1-206ENST00000526966 TRAF7Q6Q0C0 670 aa21.83■■□□□ 1.09
CAPN1-206ENST00000526966 STAG2Q8N3U4 1231 aa21.83■■□□□ 1.09
CAPN1-206ENST00000526966 C7orf31Q8N865 590 aa21.83■■□□□ 1.09
CAPN1-206ENST00000526966 PDCD2LQ9BRP1 358 aa21.83■■□□□ 1.09
CAPN1-206ENST00000526966 UBAC1Q9BSL1 405 aa21.83■■□□□ 1.09
CAPN1-206ENST00000526966 VAT1LQ9HCJ6 419 aa21.83■■□□□ 1.09
CAPN1-206ENST00000526966 MAP3K20Q9NYL2 800 aaKnown RBP21.83■■□□□ 1.09
CAPN1-206ENST00000526966 CTNNA3Q9UI47 895 aa21.83■■□□□ 1.09
CAPN1-206ENST00000526966 PPP1R11O60927 126 aaPredicted RBP21.82■■□□□ 1.08
CAPN1-206ENST00000526966 RGS20O76081 388 aa21.82■■□□□ 1.08
CAPN1-206ENST00000526966 IGHDP01880 384 aa21.82■■□□□ 1.08
CAPN1-206ENST00000526966 ZNF286BP0CG31 522 aa21.82■■□□□ 1.08
CAPN1-206ENST00000526966 DEFB103AP81534 67 aa21.82■■□□□ 1.08
CAPN1-206ENST00000526966 PTK7Q13308 1070 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms