RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PTPN22Q9Y2R2 807 aa15.63■□□□□ 0.09
CD44-224ENST00000526669 HTTP42858 3142 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 KAT6AQ92794 2004 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 TDP2O95551 362 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 BRD1O95696 1058 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 SNAI1O95863 264 aaPredicted RBP15.62■□□□□ 0.09
CD44-224ENST00000526669 XRCC5P13010 732 aaKnown RBP15.62■□□□□ 0.09
CD44-224ENST00000526669 EDNRBP24530 442 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 PRMT2P55345 433 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 IRF5Q13568 498 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 STXBP2Q15833 593 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 PCNX4Q63HM2 1172 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 OLFML2BQ68BL8 750 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 SEPT14Q6ZU15 432 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 NEK8Q86SG6 692 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 TEX2Q8IWB9 1127 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 IWS1Q96ST2 819 aa15.62■□□□□ 0.09
CD44-224ENST00000526669 MPHOSPH6Q99547 160 aaKnown RBP15.62■□□□□ 0.09
CD44-224ENST00000526669 ZHX1Q9UKY1 873 aaPredicted RBP15.62■□□□□ 0.09
CD44-224ENST00000526669 B4DLN1 442 aa15.61■□□□□ 0.09
CD44-224ENST00000526669 MFSD14CQ5VZR4 134 aa15.61■□□□□ 0.09
CD44-224ENST00000526669 MAMDC4Q6UXC1 1216 aa15.61■□□□□ 0.09
CD44-224ENST00000526669 VSIG10LQ86VR7 867 aa15.61■□□□□ 0.09
CD44-224ENST00000526669 CYP2W1Q8TAV3 490 aa15.61■□□□□ 0.09
CD44-224ENST00000526669 MORC4Q8TE76 937 aa15.61■□□□□ 0.09
CD44-224ENST00000526669 SH3TC2Q8TF17 1288 aa15.61■□□□□ 0.09
CD44-224ENST00000526669 CRYGNQ8WXF5 182 aa15.61■□□□□ 0.09
CD44-224ENST00000526669 NOL7Q9UMY1 257 aaKnown RBP15.61■□□□□ 0.09
CD44-224ENST00000526669 KIAA0100Q14667 2235 aaKnown RBP15.61■□□□□ 0.09
CD44-224ENST00000526669 SYNGAP1Q96PV0 1343 aa15.61■□□□□ 0.09
CD44-224ENST00000526669 CENPFP49454 3210 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 FAM86B1E9PN63 330 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 CCNT1O60563 726 aaKnown RBP15.6■□□□□ 0.09
CD44-224ENST00000526669 CYP3A4P08684 503 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 FAM86B2P0C5J1 330 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 GRK4P32298 578 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 TOB1P50616 345 aaPredicted RBP15.6■□□□□ 0.09
CD44-224ENST00000526669 ZNF174Q15697 407 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 TTC38Q5R3I4 469 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 MYSM1Q5VVJ2 828 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 BRAPQ7Z569 592 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 SLAIN1Q8ND83 568 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 CHAMP1Q96JM3 812 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 WDR11Q9BZH6 1224 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 PDGFCQ9NRA1 345 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 PKD2L1Q9P0L9 805 aa15.6■□□□□ 0.09
CD44-224ENST00000526669 LOC102724159A0A0B4J2E5 919 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 SLC37A4O43826 429 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 SORBS3O60504 671 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 RGS20O76081 388 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 MYCP01106 439 aaPredicted RBP15.59■□□□□ 0.09
CD44-224ENST00000526669 HMGCRP04035 888 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 INHAP05111 366 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 PRKAR2AP13861 404 aaKnown RBP15.59■□□□□ 0.09
CD44-224ENST00000526669 NUCB2P80303 420 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 CACNB2Q08289 660 aaPredicted RBP15.59■□□□□ 0.09
CD44-224ENST00000526669 ACVR2BQ13705 512 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 PWP2Q15269 919 aaKnown RBP15.59■□□□□ 0.09
CD44-224ENST00000526669 PRR16Q569H4 304 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 PLA2G4DQ86XP0 818 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 POTEDQ86YR6 584 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 TRMT44Q8IYL2 757 aaKnown RBP15.59■□□□□ 0.09
CD44-224ENST00000526669 MSL3Q8N5Y2 521 aaKnown RBP15.59■□□□□ 0.09
CD44-224ENST00000526669 TRPV1Q8NER1 839 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 MXRA8Q9BRK3 442 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 FTOQ9C0B1 505 aaKnown RBP eCLIP15.59■□□□□ 0.09
CD44-224ENST00000526669 KATNBL1Q9H079 304 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 ZSCAN16Q9H4T2 348 aaPredicted RBP15.59■□□□□ 0.09
CD44-224ENST00000526669 PRDM10Q9NQV6 1147 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 CNPY2Q9Y2B0 182 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 PCDHB6Q9Y5E3 794 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 UBIAD1Q9Y5Z9 338 aa15.59■□□□□ 0.09
CD44-224ENST00000526669 EIF3JO75822 258 aaKnown RBP15.58■□□□□ 0.08
CD44-224ENST00000526669 IGHA2P01877 340 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 ARP10275 920 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 ITGB5P18084 799 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 PTGS1P23219 599 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 CCND3P30281 292 aaPredicted RBP15.58■□□□□ 0.08
CD44-224ENST00000526669 MCM7P33993 719 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 USP11P51784 963 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 SEMA3FQ13275 785 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 SLC9C1Q4G0N8 1177 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 CEP55Q53EZ4 464 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 TMEM63BQ5T3F8 832 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 PXYLP1Q8TE99 480 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 GJA10Q969M2 543 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 LENG1Q96BZ8 264 aaPredicted RBP15.58■□□□□ 0.08
CD44-224ENST00000526669 ABHD16BQ9H3Z7 469 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 VTA1Q9NP79 307 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 CHMP5Q9NZZ3 219 aa15.58■□□□□ 0.08
CD44-224ENST00000526669 DDX25Q9UHL0 483 aaKnown RBP15.58■□□□□ 0.08
CD44-224ENST00000526669 CIZ1Q9ULV3 898 aaPredicted RBP15.58■□□□□ 0.08
CD44-224ENST00000526669 TRIP12Q14669 1992 aaPredicted RBP15.57■□□□□ 0.08
CD44-224ENST00000526669 IGLV3-22A0A075B6J6 115 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.57■□□□□ 0.08
CD44-224ENST00000526669 ARIH2O95376 493 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 ZNF865P0CJ78 1059 aaPredicted RBP15.57■□□□□ 0.08
CD44-224ENST00000526669 CYBAP13498 195 aa15.57■□□□□ 0.08
CD44-224ENST00000526669 PDIA4P13667 645 aaKnown RBP15.57■□□□□ 0.08
CD44-224ENST00000526669 CNGA1P29973 690 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms