RNA–Protein interactions for RNA: ENST00000526631.1

CCDC90B-207, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 628 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-207ENST00000526631 ARMCX2Q7L311 632 aa9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 RALYLQ86SE5 291 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 TMTC2Q8N394 836 aa9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 TRPV1Q8NER1 839 aa9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 ANKS1AQ92625 1134 aa9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 ZSCAN10Q96SZ4 725 aaPredicted RBP9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 MTA3Q9BTC8 594 aa9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 REPIN1Q9BWE0 567 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 RANBP17Q9H2T7 1088 aaKnown RBP9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 STARD7Q9NQZ5 370 aa9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 HOMER2Q9NSB8 354 aa9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 ATP11BQ9Y2G3 1177 aa9.53□□□□□ -0.88
CCDC90B-207ENST00000526631 DHX16O60231 1041 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 KPNA6O60684 536 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 KDM4AO75164 1064 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 C6orf222P0C671 652 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 GJA9P57773 515 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 HAND2P61296 217 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 ZNF543Q08ER8 600 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 SNX17Q15036 470 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 LRRC26Q2I0M4 334 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 CCDC144BQ3MJ40 725 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 MSS51Q4VC12 460 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 GNASQ5JWF2 1037 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 PRAMEF19Q5SWL8 479 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 IFIT1BQ5T764 474 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 NSMFQ6X4W1 530 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 ZNF589Q86UQ0 364 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 FAM133AQ8N9E0 248 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 PNMA1Q8ND90 353 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 MTIF3Q9H2K0 278 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 PRO3102Q9H379 93 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 A1CFQ9NQ94 594 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 ZMYND8Q9ULU4 1186 aaPredicted RBP9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 MTMR7Q9Y216 660 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 MRPL11Q9Y3B7 192 aaKnown RBP9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 RIPK3Q9Y572 518 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 ABCB11O95342 1321 aa9.52□□□□□ -0.89
CCDC90B-207ENST00000526631 ALPK3Q96L96 1907 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 PTPDC1A2A3K4 754 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 SNAI1O95863 264 aaPredicted RBP9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 CLTBP09497 229 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 SNHG28P0DPA3 235 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 PDHBP11177 359 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 RAG1P15918 1043 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 MAGEA10P43363 369 aaPredicted RBP9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 ACLYP53396 1101 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 PDE4DQ08499 809 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 FUT2Q10981 343 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 RNF20Q5VTR2 975 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 RNF207Q6ZRF8 634 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 CCDC144CPQ8IYA2 1237 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 NCOA7Q8NI08 942 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 AGBL1Q96MI9 1066 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 GPCPD1Q9NPB8 672 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 POLR3EQ9NVU0 708 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 CYP39A1Q9NYL5 469 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 LAMA4Q16363 1823 aa9.51□□□□□ -0.89
CCDC90B-207ENST00000526631 MYH6P13533 1939 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 A0A0U1RQG5 324 aaPredicted RBP9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 A0A1W2PQ45 241 aaPredicted RBP9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 A0A1W2PQY0 241 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 FOXP2O15409 715 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 NMT2O60551 498 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 PGK1P00558 417 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 SUPT20HL2P0C7V6 817 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 SYN1P17600 705 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 CPT1AP50416 773 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 NKX3-2P78367 333 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 KCNA10Q16322 511 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 KCNV1Q6PIU1 500 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 ANKRD33Q7Z3H0 272 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 KLHDC9Q8NEP7 349 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 FERMT2Q96AC1 680 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 ZFP42Q96MM3 310 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 IWS1Q96ST2 819 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 UPF3AQ9H1J1 476 aaKnown RBP9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 PRDM5Q9NQX1 630 aaPredicted RBP9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 TMEM39AQ9NV64 488 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 ZSWIM5Q9P217 1185 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 ZNF536O15090 1300 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 SYNRGQ9UMZ2 1314 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 MCM3APO60318 1980 aa9.5□□□□□ -0.89
CCDC90B-207ENST00000526631 B4E1Z4 1266 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 ADAMTS4O75173 837 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 KIF5BP33176 963 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 GNAQP50148 359 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 BAATQ14032 418 aaPredicted RBP9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 TTLL4Q14679 1199 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 ANO1Q5XXA6 986 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 RNF19BQ6ZMZ0 732 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 CENPQQ7L2Z9 268 aaPredicted RBP9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 CATIPQ7Z7H3 387 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 FBXO11Q86XK2 927 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 TMEM199Q8N511 208 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 MORC4Q8TE76 937 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 NSUN6Q8TEA1 469 aaKnown RBP9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 SCFD2Q8WU76 684 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 LZTS2Q9BRK4 669 aa9.49□□□□□ -0.89
CCDC90B-207ENST00000526631 AMNQ9BXJ7 453 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms