RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 ANKRD35Q8N283 1001 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 CYP2W1Q8TAV3 490 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 KATNBL1Q9H079 304 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 MROH8Q9H579 483 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 PDGFCQ9NRA1 345 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 SRRDQ9UH36 339 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 MTMR6Q9Y217 621 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 TRIM17Q9Y577 477 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 RPTORQ8N122 1335 aa7.45□□□□□ -1.22
CD44-214ENST00000525211 MCM3APO60318 1980 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 ESYT2A0FGR8 921 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 GCOM1H8Y6P7 765 aaPredicted RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 CDKL5O76039 1030 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 ARIH2O95376 493 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 MMP1P03956 469 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 POLR2MP0CAP2 368 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 FCER1AP12319 257 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 SYT1P21579 422 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 CTCFP49711 727 aaPredicted RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 TOB1P50616 345 aaPredicted RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 ALDH5A1P51649 535 aaPredicted RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 FCGRTP55899 365 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 CCNA1P78396 465 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 AKAP17AQ02040 695 aaKnown RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 RESTQ13127 1097 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 SEMA3FQ13275 785 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 GJC2Q5T442 439 aaPredicted RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 CPLX2Q6PUV4 134 aaKnown RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 MAMDC4Q6UXC1 1216 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 EEPD1Q7L9B9 569 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 FERMT3Q86UX7 667 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 DIS3L2Q8IYB7 885 aaKnown RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 BLIDQ8IZY5 108 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 ZNF454Q8N9F8 522 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 DAGLBQ8NCG7 672 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 RGS22Q8NE09 1264 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 IL27Q8NEV9 243 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 FBXO18Q8NFZ0 1043 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 SH3TC2Q8TF17 1288 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 CRYGNQ8WXF5 182 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 GJA10Q969M2 543 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 LENG1Q96BZ8 264 aaPredicted RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 INTS4Q96HW7 963 aaKnown RBP7.44□□□□□ -1.22
CD44-214ENST00000525211 MAML3Q96JK9 1138 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 C8orf76Q96K31 380 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 PDCD2LQ9BRP1 358 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 BEGAINQ9BUH8 593 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 FTOQ9C0B1 505 aaKnown RBP eCLIP7.44□□□□□ -1.22
CD44-214ENST00000525211 SH3GLB2Q9NR46 395 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 PXMP2Q9NR77 195 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 PCDHA4Q9UN74 947 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 MRVI1Q9Y6F6 885 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 BRCA2P51587 3418 aa7.44□□□□□ -1.22
CD44-214ENST00000525211 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.43□□□□□ -1.22
CD44-214ENST00000525211 PIK3CDO00329 1044 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 SORBS3O60504 671 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 MYCP01106 439 aaPredicted RBP7.43□□□□□ -1.22
CD44-214ENST00000525211 HOXC6P09630 235 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 EDNRBP24530 442 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 HMGN5P82970 282 aaKnown RBP7.43□□□□□ -1.22
CD44-214ENST00000525211 KCTD2Q14681 263 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 PGM5Q15124 567 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 AMHR2Q16671 573 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 INF2Q27J81 1249 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 ANO1Q5XXA6 986 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 LARP1BQ659C4 914 aaKnown RBP7.43□□□□□ -1.22
CD44-214ENST00000525211 PPP1R18Q6NYC8 613 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 PIK3AP1Q6ZUJ8 805 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 ABRAQ8N0Z2 381 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 ZNF710Q8N1W2 664 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 FAM184AQ8NB25 1140 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 COPS5Q92905 334 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 CUL5Q93034 780 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 ZDHHC16Q969W1 377 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 ERO1AQ96HE7 468 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 RMDN3Q96TC7 470 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 NUDT12Q9BQG2 462 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 ANO3Q9BYT9 981 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 RTEL1Q9NZ71 1219 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 FBXO40Q9UH90 709 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 PTPN22Q9Y2R2 807 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 FRMPD4Q14CM0 1322 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 LRRC37A2A6NM11 1700 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 ZNF236Q9UL36 1845 aa7.43□□□□□ -1.22
CD44-214ENST00000525211 RBBP6Q7Z6E9 1792 aaKnown RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 VPS37CA5D8V6 355 aaPredicted RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 FAM86B1E9PN63 330 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 STRNO43815 780 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 SLC37A4O43826 429 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 ADCY3O60266 1144 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 TDP2O95551 362 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 NR3C2P08235 984 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 FAM86B2P0C5J1 330 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 ZNF865P0CJ78 1059 aaPredicted RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 ARP10275 920 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 MYCLP12524 364 aaPredicted RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 ITGB5P18084 799 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 CCND3P30281 292 aaPredicted RBP7.42□□□□□ -1.22
CD44-214ENST00000525211 SP2Q02086 613 aa7.42□□□□□ -1.22
CD44-214ENST00000525211 CACNB2Q08289 660 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms