RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 TTC22Q5TAA0 569 aa18.93■□□□□ 0.62
HIF3A-208ENST00000524533 CYB5R4Q7L1T6 521 aa18.93■□□□□ 0.62
HIF3A-208ENST00000524533 FTOQ9C0B1 505 aaKnown RBP eCLIP18.93■□□□□ 0.62
HIF3A-208ENST00000524533 OPLAHO14841 1288 aa18.92■□□□□ 0.62
HIF3A-208ENST00000524533 EIF3JO75822 258 aaKnown RBP18.92■□□□□ 0.62
HIF3A-208ENST00000524533 NR3C2P08235 984 aa18.92■□□□□ 0.62
HIF3A-208ENST00000524533 CASTP20810 708 aaKnown RBP18.92■□□□□ 0.62
HIF3A-208ENST00000524533 HSD17B4P51659 736 aa18.92■□□□□ 0.62
HIF3A-208ENST00000524533 CCDC85BQ15834 202 aaPredicted RBP18.92■□□□□ 0.62
HIF3A-208ENST00000524533 DGKDQ16760 1214 aa18.92■□□□□ 0.62
HIF3A-208ENST00000524533 SLC9A7Q96T83 725 aa18.92■□□□□ 0.62
HIF3A-208ENST00000524533 THEGQ9P2T0 379 aa18.92■□□□□ 0.62
HIF3A-208ENST00000524533 MAD2L2Q9UI95 211 aa18.92■□□□□ 0.62
HIF3A-208ENST00000524533 MRVI1Q9Y6F6 885 aa18.92■□□□□ 0.62
HIF3A-208ENST00000524533 ZBTB5O15062 677 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 PPP1R11O60927 126 aaPredicted RBP18.91■□□□□ 0.62
HIF3A-208ENST00000524533 GHRHRQ02643 423 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 TMEM67Q5HYA8 995 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 GDF6Q6KF10 455 aaPredicted RBP18.91■□□□□ 0.62
HIF3A-208ENST00000524533 SESTD1Q86VW0 696 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 HOMER1Q86YM7 354 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 CAGE1Q8TC20 777 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 AFAP1L1Q8TED9 768 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 KAT2BQ92831 832 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 MTMR8Q96EF0 704 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 DDX41Q9UJV9 622 aaKnown RBP18.91■□□□□ 0.62
HIF3A-208ENST00000524533 PCDHA1Q9Y5I3 950 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 TRANK1O15050 2925 aa18.91■□□□□ 0.62
HIF3A-208ENST00000524533 PALM3A6NDB9 673 aaPredicted RBP18.9■□□□□ 0.62
HIF3A-208ENST00000524533 CA3P07451 260 aa18.9■□□□□ 0.62
HIF3A-208ENST00000524533 CYP21A2P08686 494 aa18.9■□□□□ 0.62
HIF3A-208ENST00000524533 RUFY2Q8WXA3 655 aa18.9■□□□□ 0.62
HIF3A-208ENST00000524533 EMID1Q96A84 441 aaPredicted RBP18.9■□□□□ 0.62
HIF3A-208ENST00000524533 PDCD2LQ9BRP1 358 aa18.9■□□□□ 0.62
HIF3A-208ENST00000524533 KATNAL1Q9BW62 490 aa18.9■□□□□ 0.62
HIF3A-208ENST00000524533 MAP3K20Q9NYL2 800 aaKnown RBP18.9■□□□□ 0.62
HIF3A-208ENST00000524533 U3KPZ7 1027 aaPredicted RBP18.9■□□□□ 0.62
HIF3A-208ENST00000524533 MYO9BQ13459 2157 aa18.9■□□□□ 0.62
HIF3A-208ENST00000524533 MYH7BA7E2Y1 1941 aa18.9■□□□□ 0.62
HIF3A-208ENST00000524533 PTPRSQ13332 1948 aa18.9■□□□□ 0.62
HIF3A-208ENST00000524533 TRIP12Q14669 1992 aaPredicted RBP18.9■□□□□ 0.62
HIF3A-208ENST00000524533 TTC28Q96AY4 2481 aa18.9■□□□□ 0.62
HIF3A-208ENST00000524533 ERICH2A1L162 156 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 IFIT3O14879 490 aaKnown RBP18.89■□□□□ 0.61
HIF3A-208ENST00000524533 BAIAP3O94812 1187 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 ZNF286BP0CG31 522 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 MYCLP12524 364 aaPredicted RBP18.89■□□□□ 0.61
HIF3A-208ENST00000524533 TRAF1Q13077 416 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 LAMC2Q13753 1193 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 GRM4Q14833 912 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 RALYLQ86SE5 291 aaKnown RBP18.89■□□□□ 0.61
HIF3A-208ENST00000524533 DHX37Q8IY37 1157 aaKnown RBP18.89■□□□□ 0.61
HIF3A-208ENST00000524533 C7orf31Q8N865 590 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 PPTC7Q8NI37 304 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 PHOSPHO2Q8TCD6 241 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 ATXN2LQ8WWM7 1075 aaKnown RBP18.89■□□□□ 0.61
HIF3A-208ENST00000524533 CTAGE1Q96RT6 745 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 GTF2IRD1Q9UHL9 959 aa18.89■□□□□ 0.61
HIF3A-208ENST00000524533 F2P00734 622 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 SELPP16109 830 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 HOXA13P31271 388 aaPredicted RBP18.88■□□□□ 0.61
HIF3A-208ENST00000524533 PSEN2P49810 448 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 PTH1RQ03431 593 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 MFSD10Q14728 455 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 PGM5Q15124 567 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 STOX1Q6ZVD7 989 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 LRRC8DQ7L1W4 858 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 MICALL1Q8N3F8 863 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 SAMD3Q8N6K7 520 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 DHX38Q92620 1227 aaKnown RBP18.88■□□□□ 0.61
HIF3A-208ENST00000524533 PIGSQ96S52 555 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 ALG1Q9BT22 464 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 HDAC6Q9UBN7 1215 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 TET1Q8NFU7 2136 aa18.88■□□□□ 0.61
HIF3A-208ENST00000524533 CHMLP26374 656 aa18.87■□□□□ 0.61
HIF3A-208ENST00000524533 KCNJ6P48051 423 aa18.87■□□□□ 0.61
HIF3A-208ENST00000524533 COL4A4P53420 1690 aaPredicted RBP18.87■□□□□ 0.61
HIF3A-208ENST00000524533 WTAPQ15007 396 aa18.87■□□□□ 0.61
HIF3A-208ENST00000524533 SART3Q15020 963 aaKnown RBP18.87■□□□□ 0.61
HIF3A-208ENST00000524533 KIAA0753Q2KHM9 967 aa18.87■□□□□ 0.61
HIF3A-208ENST00000524533 KCNV1Q6PIU1 500 aa18.87■□□□□ 0.61
HIF3A-208ENST00000524533 HERC6Q8IVU3 1022 aa18.87■□□□□ 0.61
HIF3A-208ENST00000524533 RIOX1Q9H6W3 641 aa18.87■□□□□ 0.61
HIF3A-208ENST00000524533 SUPT16HQ9Y5B9 1047 aaKnown RBP18.87■□□□□ 0.61
HIF3A-208ENST00000524533 KIF28PB7ZC32 967 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 GCOM1H8Y6P7 765 aaPredicted RBP18.86■□□□□ 0.61
HIF3A-208ENST00000524533 RGS20O76081 388 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 POLR2MP0CAP2 368 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 CCND2P30279 289 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 RBL2Q08999 1139 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 SLC35G1Q2M3R5 365 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 NCOA7Q8NI08 942 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 IL31RAQ8NI17 732 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 ASB2Q96Q27 587 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 TSPYL2Q9H2G4 693 aaPredicted RBP18.86■□□□□ 0.61
HIF3A-208ENST00000524533 CERS4Q9HA82 394 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 SENP2Q9HC62 589 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 TAF6LQ9Y6J9 622 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 REV3LO60673 3130 aa18.86■□□□□ 0.61
HIF3A-208ENST00000524533 E7EWF7 191 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms