RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 CARFQ8N187 725 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 USP33Q8TEY7 942 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 BTN2A2Q8WVV5 523 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 MTA3Q9BTC8 594 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 RXFP1Q9HBX9 757 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 ST7Q9NRC1 585 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 IGSF5Q9NSI5 407 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 USP40Q9NVE5 1235 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 GULP1Q9UBP9 304 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 FBLN5Q9UBX5 448 aa4.96□□□□□ -1.62
LINCR-0001-203ENST00000524047 SYNJ1O43426 1573 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 TOP2BQ02880 1626 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 TBX1O43435 398 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 NOBOXO60393 691 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 GJB6O95452 261 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 THBDP07204 575 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 CACNB2Q08289 660 aaPredicted RBP4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 ZNF227Q86WZ6 799 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 SLC43A3Q8NBI5 491 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 COPS5Q92905 334 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 MRGPRX3Q96LB0 322 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 NKX2-4Q9H2Z4 354 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 BTG4Q9NY30 223 aa4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 WRNQ14191 1432 aaPredicted RBP eCLIP4.95□□□□□ -1.62
LINCR-0001-203ENST00000524047 C7orf72A4D263 438 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 NPHS1O60500 1241 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 SNRPB2P08579 225 aaKnown RBP4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 ECI1P42126 302 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 KCNJ6P48051 423 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 ZC3H6P61129 1189 aaKnown RBP4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 ZXDCQ2QGD7 858 aaPredicted RBP4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 WWC2Q6AWC2 1192 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 HHIPL2Q6UWX4 724 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 EEPD1Q7L9B9 569 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 CELF2-AS1Q8N7Q2 184 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 SMARCC2Q8TAQ2 1214 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 GMLQ99445 158 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 LNPKQ9C0E8 428 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 BCAS3Q9H6U6 928 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 CYP26B1Q9NR63 512 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 NTMQ9P121 344 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 KIF21BO75037 1637 aa4.94□□□□□ -1.62
LINCR-0001-203ENST00000524047 K7ESM1 405 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 AGRPO00253 132 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 FUCA1P04066 466 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 DDR2Q16832 855 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 NAALADL2Q58DX5 795 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 MBLAC2Q68D91 279 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 FERMT3Q86UX7 667 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 LINC00482Q8N8I6 264 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 NOX5Q96PH1 765 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 SPATA6Q9NWH7 488 aaPredicted RBP4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 MARCH2Q9P0N8 246 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 PPP1R1BQ9UD71 204 aaPredicted RBP4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 DUSP10Q9Y6W6 482 aa4.93□□□□□ -1.62
LINCR-0001-203ENST00000524047 SARSP49591 514 aaKnown RBP4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 GJA9P57773 515 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 SF1Q15637 639 aaKnown RBP4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 PRSS53Q2L4Q9 553 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 SLC10A6Q3KNW5 377 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 TTLL7Q6ZT98 887 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 ZNF761Q86XN6 746 aaPredicted RBP4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 FAM9AQ8IZU1 332 aaPredicted RBP4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 PLEKHO2Q8TD55 490 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 FRS2Q8WU20 508 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 MMP19Q99542 508 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 TRIM55Q9BYV6 548 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 PCDH18Q9HCL0 1135 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 MYRFQ9Y2G1 1151 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 CC2D2AQ9P2K1 1620 aa4.92□□□□□ -1.62
LINCR-0001-203ENST00000524047 STK10O94804 968 aaKnown RBP4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 NTRK1P04629 796 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 ITGB3P05106 788 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 HOXC12P31275 282 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 CNR2P34972 360 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 MAGEA10P43363 369 aaPredicted RBP4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 CYP4F3Q08477 520 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 ZNF827Q17R98 1081 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 INF2Q27J81 1249 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 TEX2Q8IWB9 1127 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 NPLOC4Q8TAT6 608 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 DPF3Q92784 378 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 ZBTB8AQ96BR9 441 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 RBM15Q96T37 977 aaKnown RBP eCLIP4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 EPN3Q9H201 632 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 PALD1Q9ULE6 856 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 SIT1Q9Y3P8 196 aa4.91□□□□□ -1.62
LINCR-0001-203ENST00000524047 CFTRP13569 1480 aa4.9□□□□□ -1.62
LINCR-0001-203ENST00000524047 GOLGA3Q08378 1498 aa4.9□□□□□ -1.62
LINCR-0001-203ENST00000524047 C22orf46C9J442 243 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 MEFVO15553 781 aaPredicted RBP4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 KLF4O43474 513 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 CYP2C8P10632 490 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 GRIA2P42262 883 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 RPL11P62913 178 aaKnown RBP4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 PPP2R2AP63151 447 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 IQCEQ6IPM2 695 aa4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 DCP2Q8IU60 420 aaKnown RBP4.9□□□□□ -1.63
LINCR-0001-203ENST00000524047 CCDC103Q8IW40 242 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms