RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 KIAA0556O60303 1618 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 A0A1W2PQH9 124 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 STXBP3O00186 592 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 EPHX1P07099 455 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 GIPRP48546 466 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 PUM1Q14671 1186 aaKnown RBP eCLIP6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 DPY19L1Q2PZI1 675 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 HEATR6Q6AI08 1181 aaKnown RBP6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 C19orf47Q8N9M1 422 aaKnown RBP6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 KLHL6Q8WZ60 621 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 PHAXQ9H814 394 aaKnown RBP6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 GINM1Q9NU53 330 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 GULP1Q9UBP9 304 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 CGGBP1Q9UFW8 167 aaPredicted RBP6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 NUDT5Q9UKK9 219 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 FHAD1B1AJZ9 1412 aa6.58□□□□□ -1.36
NSMCE2-211ENST00000523549 FRMPD1Q5SYB0 1578 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 SETBP1Q9Y6X0 1596 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 ARAP3Q8WWN8 1544 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 C7orf72A4D263 438 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 SOX9P48436 509 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 SEPHS1P49903 392 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 ADAM17P78536 824 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 GRB10Q13322 594 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 ZNF827Q17R98 1081 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 CCDC81Q6ZN84 652 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 FGD4Q96M96 766 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 GPR20Q99678 358 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 GBP3Q9H0R5 595 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 NTMQ9P121 344 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 PCDHB10Q9UN67 800 aa6.57□□□□□ -1.36
NSMCE2-211ENST00000523549 ARHGEF40Q8TER5 1519 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 ABCA10Q8WWZ4 1543 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 PPM1BO75688 479 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 PAMP19021 973 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 GJA9P57773 515 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 AMPD2Q01433 879 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 SLC7A5Q01650 507 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 WWC2Q6AWC2 1192 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 TTLL7Q6ZT98 887 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 PLEKHO2Q8TD55 490 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 KRTAP3-1Q9BYR8 98 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 ALKQ9UM73 1620 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 SETD1BQ9UPS6 1966 aaKnown RBP6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 UHRF1BP1Q6BDS2 1440 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 CD109Q6YHK3 1445 aa6.56□□□□□ -1.36
NSMCE2-211ENST00000523549 TRBV23OR9-2A0A075B6M9 112 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 NTRK1P04629 796 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 EIF6P56537 245 aaKnown RBP6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 ADAT2Q7Z6V5 191 aaKnown RBP6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 ADAMTS17Q8TE56 1095 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 COPS5Q92905 334 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 ZBTB8AQ96BR9 441 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 DDX11Q96FC9 970 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 CRBNQ96SW2 442 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 SYT3Q9BQG1 590 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 GORASP1Q9BQQ3 440 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 C1QTNF3Q9BXJ4 246 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 SIT1Q9Y3P8 196 aa6.55□□□□□ -1.36
NSMCE2-211ENST00000523549 PTPRGP23470 1445 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 NPHP3-ACAD11A0A0J9YXS1 232 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 C8BP07358 591 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 PAK2Q13177 524 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 RASGRP4Q8TDF6 673 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 DPF3Q92784 378 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 SPATA32Q96LK8 384 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 MMP19Q99542 508 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 C11orf84Q9BUA3 381 aaPredicted RBP6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 SSBP3Q9BWW4 388 aaPredicted RBP6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 SMPD4Q9NXE4 827 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 PALD1Q9ULE6 856 aa6.54□□□□□ -1.36
NSMCE2-211ENST00000523549 NCOA1Q15788 1441 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 C1QTNF3-AMACRE9PGA6 284 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 NPHS1O60500 1241 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 FUCA1P04066 466 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 TNFRSF1AP19438 455 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 RPL13P26373 211 aaKnown RBP6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 SMAD4Q13485 552 aaKnown RBP6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 TBC1D10BQ4KMP7 808 aaPredicted RBP6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 MBLAC2Q68D91 279 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 OR6P1Q8NGX9 317 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 USP33Q8TEY7 942 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 PCDH18Q9HCL0 1135 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 EFR3BQ9Y2G0 817 aa6.53□□□□□ -1.36
NSMCE2-211ENST00000523549 SGSM2O43147 1006 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 RAPGEF3O95398 923 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 PLATP00750 562 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 CYP2C8P10632 490 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 THBS2P35442 1172 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 METTL16Q86W50 562 aaKnown RBP6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 MIB1Q86YT6 1006 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 ZNF654Q8IZM8 581 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 TTC9BQ8N6N2 239 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 KYQ8NBH2 561 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 SAMD11Q96NU1 681 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 UHRF1BP1LA0JNW5 1464 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 WDR7Q9Y4E6 1490 aa6.52□□□□□ -1.37
NSMCE2-211ENST00000523549 KDM5BQ9UGL1 1544 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms