RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 MORC4Q8TE76 937 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 TINF2Q9BSI4 451 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 RTEL1Q9NZ71 1219 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 LRRC37A2A6NM11 1700 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 FAM86B1E9PN63 330 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 CCNT1O60563 726 aaKnown RBP18.51■□□□□ 0.55
LSM1-204ENST00000522515 TDP2O95551 362 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 FAM86B2P0C5J1 330 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 TRAPPC10P48553 1259 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 TTC38Q5R3I4 469 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 XRRA1Q6P2D8 792 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 CYP2W1Q8TAV3 490 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 MPHOSPH6Q99547 160 aaKnown RBP18.51■□□□□ 0.55
LSM1-204ENST00000522515 PCDHB6Q9Y5E3 794 aa18.51■□□□□ 0.55
LSM1-204ENST00000522515 B4DLN1 442 aa18.5■□□□□ 0.55
LSM1-204ENST00000522515 SNAI1O95863 264 aaPredicted RBP18.5■□□□□ 0.55
LSM1-204ENST00000522515 IGHA2P01877 340 aa18.5■□□□□ 0.55
LSM1-204ENST00000522515 CIITAP33076 1130 aa18.5■□□□□ 0.55
LSM1-204ENST00000522515 ZNF76P36508 570 aa18.5■□□□□ 0.55
LSM1-204ENST00000522515 IRF5Q13568 498 aa18.5■□□□□ 0.55
LSM1-204ENST00000522515 OLFML2BQ68BL8 750 aa18.5■□□□□ 0.55
LSM1-204ENST00000522515 EEPD1Q7L9B9 569 aa18.5■□□□□ 0.55
LSM1-204ENST00000522515 MSL3Q8N5Y2 521 aaKnown RBP18.5■□□□□ 0.55
LSM1-204ENST00000522515 UBIAD1Q9Y5Z9 338 aa18.5■□□□□ 0.55
LSM1-204ENST00000522515 MCM3APO60318 1980 aa18.5■□□□□ 0.55
LSM1-204ENST00000522515 SYNGAP1Q96PV0 1343 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 MYH15Q9Y2K3 1946 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 IGLV3-22A0A075B6J6 115 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 CYP3A7-CYP3A51PA0A087WV96 503 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 EIF3JO75822 258 aaKnown RBP18.49■□□□□ 0.55
LSM1-204ENST00000522515 RGS20O76081 388 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 ITGB5P18084 799 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 CYP3A7P24462 503 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 CYP2C19P33261 490 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 PRMT2P55345 433 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 ZNF174Q15697 407 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 CEP55Q53EZ4 464 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 PPP4R3AQ6IN85 833 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 TRIB2Q92519 343 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 MXRA8Q9BRK3 442 aa18.49■□□□□ 0.55
LSM1-204ENST00000522515 FTOQ9C0B1 505 aaKnown RBP eCLIP18.49■□□□□ 0.55
LSM1-204ENST00000522515 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.49■□□□□ 0.55
LSM1-204ENST00000522515 SLC37A4O43826 429 aa18.48■□□□□ 0.55
LSM1-204ENST00000522515 MCM7P33993 719 aa18.48■□□□□ 0.55
LSM1-204ENST00000522515 DNM1Q05193 864 aaKnown RBP18.48■□□□□ 0.55
LSM1-204ENST00000522515 MOXD1Q6UVY6 613 aa18.48■□□□□ 0.55
LSM1-204ENST00000522515 RAET1EQ8TD07 263 aa18.48■□□□□ 0.55
LSM1-204ENST00000522515 LENG9Q96B70 501 aa18.48■□□□□ 0.55
LSM1-204ENST00000522515 MBOAT7Q96N66 472 aa18.48■□□□□ 0.55
LSM1-204ENST00000522515 INPP4AQ96PE3 977 aaPredicted RBP18.48■□□□□ 0.55
LSM1-204ENST00000522515 WDR11Q9BZH6 1224 aa18.48■□□□□ 0.55
LSM1-204ENST00000522515 ATP6V1DQ9Y5K8 247 aa18.48■□□□□ 0.55
LSM1-204ENST00000522515 MEIS1O00470 390 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 ADCY3O60266 1144 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 STAM2O75886 525 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 ELNP15502 786 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 GCFC2P16383 781 aaKnown RBP18.47■□□□□ 0.55
LSM1-204ENST00000522515 PRR16Q569H4 304 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 FBXO16Q8IX29 292 aaPredicted RBP18.47■□□□□ 0.55
LSM1-204ENST00000522515 USP28Q96RU2 1077 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 NAP1L4Q99733 375 aaKnown RBP18.47■□□□□ 0.55
LSM1-204ENST00000522515 KATNBL1Q9H079 304 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 JADE2Q9NQC1 790 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.47■□□□□ 0.55
LSM1-204ENST00000522515 TFIP11Q9UBB9 837 aaKnown RBP18.47■□□□□ 0.55
LSM1-204ENST00000522515 DDX25Q9UHL0 483 aaKnown RBP18.47■□□□□ 0.55
LSM1-204ENST00000522515 CLIC4Q9Y696 253 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 CEBPZQ03701 1054 aaKnown RBP18.47■□□□□ 0.55
LSM1-204ENST00000522515 Q4G0T1 1027 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 SEPT14Q6ZU15 432 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 PLA2G4DQ86XP0 818 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 TNPO1Q92973 898 aaKnown RBP18.47■□□□□ 0.55
LSM1-204ENST00000522515 ZNF396Q96N95 335 aaPredicted RBP18.47■□□□□ 0.55
LSM1-204ENST00000522515 PTCH2Q9Y6C5 1203 aa18.47■□□□□ 0.55
LSM1-204ENST00000522515 ARP10275 920 aa18.46■□□□□ 0.55
LSM1-204ENST00000522515 SF3A1Q15459 793 aaKnown RBP18.46■□□□□ 0.55
LSM1-204ENST00000522515 PRAMEF19Q5SWL8 479 aa18.46■□□□□ 0.55
LSM1-204ENST00000522515 NIPA1Q7RTP0 329 aa18.46■□□□□ 0.55
LSM1-204ENST00000522515 TRMT44Q8IYL2 757 aaKnown RBP18.46■□□□□ 0.55
LSM1-204ENST00000522515 PXYLP1Q8TE99 480 aa18.46■□□□□ 0.55
LSM1-204ENST00000522515 UIMC1Q96RL1 719 aa18.46■□□□□ 0.55
LSM1-204ENST00000522515 ABHD16BQ9H3Z7 469 aa18.46■□□□□ 0.55
LSM1-204ENST00000522515 KCNH7Q9NS40 1196 aa18.46■□□□□ 0.55
LSM1-204ENST00000522515 PTPN22Q9Y2R2 807 aa18.46■□□□□ 0.55
LSM1-204ENST00000522515 KIAA1217Q5T5P2 1943 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 NEMFO60524 1076 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 TRIM32Q13049 653 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 SEMA3FQ13275 785 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 MTMR1Q13613 665 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 ACVR2BQ13705 512 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 GNPTABQ3T906 1256 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 ANO1Q5XXA6 986 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 TAPT1Q6NXT6 567 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 NLRX1Q86UT6 975 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 GPRASP2Q96D09 838 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 TMEM60Q9H2L4 133 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 VTA1Q9NP79 307 aa18.45■□□□□ 0.54
LSM1-204ENST00000522515 PDGFCQ9NRA1 345 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms