RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PRPHP41219 470 aa14.83□□□□□ -0.04
CPNE3-205ENST00000522240 PSEN1P49768 467 aa14.83□□□□□ -0.04
CPNE3-205ENST00000522240 BAATQ14032 418 aaPredicted RBP14.83□□□□□ -0.04
CPNE3-205ENST00000522240 ZNF174Q15697 407 aa14.83□□□□□ -0.04
CPNE3-205ENST00000522240 ARL6IP4Q66PJ3 421 aaKnown RBP14.83□□□□□ -0.04
CPNE3-205ENST00000522240 FERMT2Q96AC1 680 aa14.83□□□□□ -0.04
CPNE3-205ENST00000522240 LRRC37A2A6NM11 1700 aa14.83□□□□□ -0.04
CPNE3-205ENST00000522240 PEX10O60683 326 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 CUTAO60888 179 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 TDP2O95551 362 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 MBD3O95983 291 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 BCRP11274 1271 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 PTPREP23469 700 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 ME1P48163 572 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 RGS19P49795 217 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 PTGDRQ13258 359 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 Q3C1V9 767 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 XRRA1Q6P2D8 792 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 ANKRD35Q8N283 1001 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 ANKRD13CQ8N6S4 541 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 KRI1Q8N9T8 703 aaKnown RBP14.82□□□□□ -0.04
CPNE3-205ENST00000522240 DNERQ8NFT8 737 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 ZFYVE28Q9HCC9 887 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 PXMP2Q9NR77 195 aa14.82□□□□□ -0.04
CPNE3-205ENST00000522240 FBXO2Q9UK22 296 aaPredicted RBP14.82□□□□□ -0.04
CPNE3-205ENST00000522240 SRPRBQ9Y5M8 271 aaKnown RBP14.82□□□□□ -0.04
CPNE3-205ENST00000522240 A0A1W2PQ27 194 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 A0A1W2PQ64 194 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 A0A1W2PQD8 194 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 GOLGA6L4A6NEF3 574 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 TLR2O60603 784 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 OR52Z1P0C646 297 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 SKOR2Q2VWA4 1001 aaPredicted RBP14.81□□□□□ -0.04
CPNE3-205ENST00000522240 Q4G0T1 1027 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 PCNX4Q63HM2 1172 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 ADALQ6DHV7 355 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 NIPA1Q7RTP0 329 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 ABRAQ8N0Z2 381 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 C4orf32Q8N8J7 132 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 RMDN3Q96TC7 470 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 PDCD2LQ9BRP1 358 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 DDX25Q9UHL0 483 aaKnown RBP14.81□□□□□ -0.04
CPNE3-205ENST00000522240 PCDHA7Q9UN72 937 aa14.81□□□□□ -0.04
CPNE3-205ENST00000522240 LOC102724159A0A0B4J2E5 919 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 POTEB2H3BUK9 544 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 TBX3O15119 743 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 SLC37A4O43826 429 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 MARCKSP29966 332 aaPredicted RBP14.8□□□□□ -0.04
CPNE3-205ENST00000522240 MAPK4P31152 587 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 SETQ01105 290 aaPredicted RBP14.8□□□□□ -0.04
CPNE3-205ENST00000522240 GRM1Q13255 1194 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 KCTD2Q14681 263 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 PGM5Q15124 567 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 PWP2Q15269 919 aaKnown RBP14.8□□□□□ -0.04
CPNE3-205ENST00000522240 AXDND1Q5T1B0 1012 aaPredicted RBP14.8□□□□□ -0.04
CPNE3-205ENST00000522240 C17orf99Q6UX52 265 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 FAM133AQ8N9E0 248 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 NSUN6Q8TEA1 469 aaKnown RBP14.8□□□□□ -0.04
CPNE3-205ENST00000522240 TAAR1Q96RJ0 339 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 MMP19Q99542 508 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 PORCNQ9H237 461 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 TMEM60Q9H2L4 133 aa14.8□□□□□ -0.04
CPNE3-205ENST00000522240 DNAJC25-GNG10A0A024R161 153 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 IGLV3-22A0A075B6J6 115 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 STRNO43815 780 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 AOC2O75106 756 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 GADD45BO75293 160 aaPredicted RBP14.79□□□□□ -0.04
CPNE3-205ENST00000522240 STAM2O75886 525 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 FCER1AP12319 257 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 EIF2AK2P19525 551 aaKnown RBP14.79□□□□□ -0.04
CPNE3-205ENST00000522240 CCND2P30279 289 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 CALCRLQ16602 461 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 KLHL40Q2TBA0 621 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 CEP55Q53EZ4 464 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 ARHGEF16Q5VV41 709 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 LENG9Q96B70 501 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 MTMR9Q96QG7 549 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 IWS1Q96ST2 819 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 ZIC5Q96T25 663 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 CFHR5Q9BXR6 569 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 EFCC1Q9HA90 598 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 KCNMB3Q9NPA1 279 aa14.79□□□□□ -0.04
CPNE3-205ENST00000522240 ADD3Q9UEY8 706 aaKnown RBP14.79□□□□□ -0.04
CPNE3-205ENST00000522240 FAM237AA0A1B0GTK4 181 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 B4DLN1 442 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 FAM86B1E9PN63 330 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 FAM86B2P0C5J1 330 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 EDNRBP24530 442 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 ZNF76P36508 570 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 LONP1P36776 959 aaKnown RBP14.78□□□□□ -0.04
CPNE3-205ENST00000522240 ALDH5A1P51649 535 aaPredicted RBP14.78□□□□□ -0.04
CPNE3-205ENST00000522240 MLLT1Q03111 559 aaPredicted RBP14.78□□□□□ -0.04
CPNE3-205ENST00000522240 CRHR2Q13324 411 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 CCAR1Q8IX12 1150 aaKnown RBP14.78□□□□□ -0.04
CPNE3-205ENST00000522240 SLFN12Q8IYM2 578 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 IL31RAQ8NI17 732 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 MRPS27Q92552 414 aaKnown RBP14.78□□□□□ -0.04
CPNE3-205ENST00000522240 MPHOSPH6Q99547 160 aaKnown RBP14.78□□□□□ -0.04
CPNE3-205ENST00000522240 CPA4Q9UI42 421 aa14.78□□□□□ -0.04
CPNE3-205ENST00000522240 UBIAD1Q9Y5Z9 338 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms