RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 CNNM4Q6P4Q7 775 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 SPICE1Q8N0Z3 855 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 THAP9Q9H5L6 903 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 TRIM37O94972 964 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 GDF11O95390 407 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 EPS15P42566 896 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 RHBDL3P58872 404 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 GPS2Q13227 327 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 CASP8Q14790 479 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 ZFPM1Q8IX07 1006 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 ZC3H12CQ9C0D7 883 aaKnown RBP13.51□□□□□ -0.25
DENND3-217ENST00000521835 DDX25Q9UHL0 483 aaKnown RBP13.51□□□□□ -0.25
DENND3-217ENST00000521835 RSPH14Q9UHP6 348 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 CAPN6Q9Y6Q1 641 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 A0A1B0GUL6 1792 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 POTEB3A0JP26 581 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 LRRC10BA6NIK2 292 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 LRRC53A6NM62 1247 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 POTECB2RU33 542 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 TOM1O60784 492 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 GFPT1Q06210 699 aaPredicted RBP13.51□□□□□ -0.25
DENND3-217ENST00000521835 ECM1Q16610 540 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 BEND6Q5SZJ8 279 aaPredicted RBP13.51□□□□□ -0.25
DENND3-217ENST00000521835 POTEBQ6S5H4 581 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 HDXQ7Z353 690 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 ADGRF4Q8IZF3 695 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 ADAM21Q9UKJ8 722 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 CAPN11Q9UMQ6 739 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 KIAA1024Q9UPX6 916 aa13.51□□□□□ -0.25
DENND3-217ENST00000521835 SRGNP10124 158 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 KRT83P78385 493 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 RASSF7Q02833 373 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 CCDC181Q5TID7 509 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 NFRKBQ6P4R8 1299 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 EGFL6Q8IUX8 553 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 SPZ1Q9BXG8 430 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 NDST4Q9H3R1 872 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 HAUS4Q9H6D7 363 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 BLOC1S4Q9NUP1 217 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 MTMR4Q9NYA4 1195 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 PACSIN2Q9UNF0 486 aaPredicted RBP13.5□□□□□ -0.25
DENND3-217ENST00000521835 LRRIQ3A6PVS8 624 aaPredicted RBP13.5□□□□□ -0.25
DENND3-217ENST00000521835 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 TCERG1LQ5VWI1 586 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 ZNF507Q8TCN5 953 aa13.5□□□□□ -0.25
DENND3-217ENST00000521835 DHTKD1Q96HY7 919 aaPredicted RBP13.5□□□□□ -0.25
DENND3-217ENST00000521835 RBM17Q96I25 401 aaKnown RBP13.5□□□□□ -0.25
DENND3-217ENST00000521835 GPR75-ASB3A0A0A6YYF3 556 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 RASSF10A6NK89 507 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 PDE2AO00408 941 aaPredicted RBP13.49□□□□□ -0.25
DENND3-217ENST00000521835 KCNB1Q14721 858 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 BRD3Q15059 726 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 HERC4Q5GLZ8 1057 aaPredicted RBP13.49□□□□□ -0.25
DENND3-217ENST00000521835 FAM114A1Q8IWE2 563 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 PNMA5Q96PV4 448 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 FAM53CQ9NYF3 392 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.49□□□□□ -0.25
DENND3-217ENST00000521835 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 SNED1Q8TER0 1413 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 ZNF263O14978 683 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 GYS1P13807 737 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 CYP2C19P33261 490 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 UBXN2AP68543 259 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 RAPGEF1Q13905 1077 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 CT47A1Q5JQC4 288 aaPredicted RBP13.49□□□□□ -0.25
DENND3-217ENST00000521835 MIIPQ5JXC2 388 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 COG1Q8WTW3 980 aa13.49□□□□□ -0.25
DENND3-217ENST00000521835 POTEFA5A3E0 1075 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
DENND3-217ENST00000521835 EIF3JO75822 258 aaKnown RBP13.48□□□□□ -0.25
DENND3-217ENST00000521835 POTEIP0CG38 1075 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 ATP2B4P23634 1241 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 KIF11P52732 1056 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 TTC19Q6DKK2 380 aaPredicted RBP13.48□□□□□ -0.25
DENND3-217ENST00000521835 POTEGQ6S5H5 508 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 POTEEQ6S8J3 1075 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 DNAJC7Q99615 494 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 GOLPH3Q9H4A6 298 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 PSTPIP2Q9H939 334 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 PCDHA12Q9UN75 941 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 CHMP2AO43633 222 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 MYBL2P10244 700 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 PLCG2P16885 1265 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 HOXA13P31271 388 aaPredicted RBP13.48□□□□□ -0.25
DENND3-217ENST00000521835 PPP4CP60510 307 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 POLR2FP61218 127 aaKnown RBP13.48□□□□□ -0.25
DENND3-217ENST00000521835 ZBED6P86452 979 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 ZYXQ15942 572 aaKnown RBP13.48□□□□□ -0.25
DENND3-217ENST00000521835 PRR16Q569H4 304 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 CERS5Q8N5B7 392 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 PROCA1Q8NCQ7 364 aaPredicted RBP13.48□□□□□ -0.25
DENND3-217ENST00000521835 HDAC7Q8WUI4 952 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 JMJD4Q9H9V9 463 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 ARHGAP20Q9P2F6 1191 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 DDR1Q08345 913 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 PABPC4Q13310 644 aaKnown RBP eCLIP13.48□□□□□ -0.25
DENND3-217ENST00000521835 VPS72Q15906 364 aa13.48□□□□□ -0.25
DENND3-217ENST00000521835 DCAF17Q5H9S7 520 aaPredicted RBP13.48□□□□□ -0.25
DENND3-217ENST00000521835 RC3H1Q5TC82 1133 aaKnown RBP13.48□□□□□ -0.25
DENND3-217ENST00000521835 GPBP1Q86WP2 473 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms