RNA–Protein interactions for RNA: ENST00000520600.1

CHRNA2-205, Transcript of cholinergic receptor nicotinic alpha 2 subunit, humanhuman

TSL 1 (best)

Gene CHRNA2, Length 1,468 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA2-205ENST00000520600 RNPC3Q96LT9 517 aaKnown RBP16.41■□□□□ 0.22
CHRNA2-205ENST00000520600 MAP3K14Q99558 947 aa16.41■□□□□ 0.22
CHRNA2-205ENST00000520600 PPP1R12CQ9BZL4 782 aa16.41■□□□□ 0.22
CHRNA2-205ENST00000520600 ZSWIM6Q9HCJ5 1215 aa16.41■□□□□ 0.22
CHRNA2-205ENST00000520600 NR3C2P08235 984 aa16.4■□□□□ 0.22
CHRNA2-205ENST00000520600 HOXA13P31271 388 aaPredicted RBP16.4■□□□□ 0.22
CHRNA2-205ENST00000520600 COL9A3Q14050 684 aaPredicted RBP16.4■□□□□ 0.22
CHRNA2-205ENST00000520600 ANKRD1Q15327 319 aa16.4■□□□□ 0.22
CHRNA2-205ENST00000520600 CCDC62Q6P9F0 684 aa16.4■□□□□ 0.22
CHRNA2-205ENST00000520600 RUFY3Q7L099 469 aa16.4■□□□□ 0.22
CHRNA2-205ENST00000520600 NEK1Q96PY6 1258 aa16.4■□□□□ 0.22
CHRNA2-205ENST00000520600 MTG1Q9BT17 334 aaPredicted RBP16.4■□□□□ 0.22
CHRNA2-205ENST00000520600 MYH7BA7E2Y1 1941 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 A6NJR5 290 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 GCOM1H8Y6P7 765 aaPredicted RBP16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 K7ELQ4 463 aaPredicted RBP16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 B4GALT4O60513 344 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 EIF3JO75822 258 aaKnown RBP16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 GH1P01241 217 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 POLR2MP0CAP2 368 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 LIFRP42702 1097 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 PPIGQ13427 754 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 LY6KQ17RY6 165 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 TMEM199Q8N511 208 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 RRP36Q96EU6 259 aaKnown RBP16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 PDCD2LQ9BRP1 358 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 SPZ1Q9BXG8 430 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 LRRC2Q9BYS8 371 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 TRPV6Q9H1D0 765 aa16.39■□□□□ 0.21
CHRNA2-205ENST00000520600 KPNA6O60684 536 aa16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 MYCLP12524 364 aaPredicted RBP16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 RXRAP19793 462 aa16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 CYP2C18P33260 490 aa16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 FCHSD1Q86WN1 690 aa16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 LZTS2Q9BRK4 669 aa16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 ALDH8A1Q9H2A2 487 aaPredicted RBP16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 HIPK3Q9H422 1215 aa16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 PDRG1Q9NUG6 133 aa16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 SEC63Q9UGP8 760 aaKnown RBP16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 SLC12A7Q9Y666 1083 aa16.38■□□□□ 0.21
CHRNA2-205ENST00000520600 PLEKHA8P1O95397 391 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 HSP90AA1P07900 732 aaKnown RBP16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 CALM1P0DP23 149 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 CALM2P0DP24 149 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 CALM3P0DP25 149 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 CSF2RAP15509 400 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 SMARCA1P28370 1054 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 GNAQP50148 359 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 PGM5Q15124 567 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 NBPF20Q3BBV1 942 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 AFG1LQ8WV93 481 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 UPF3BQ9BZI7 483 aaKnown RBP16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 MRVI1Q9Y6F6 885 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 COL6A3P12111 3177 aa16.37■□□□□ 0.21
CHRNA2-205ENST00000520600 MMP3P08254 477 aa16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 CCND2P30279 289 aa16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 SMAD3P84022 425 aaKnown RBP16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 ARHGAP1Q07960 439 aa16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 FAM47CQ5HY64 1035 aa16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 RAB11FIP4Q86YS3 637 aa16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 NOC4LQ9BVI4 516 aaKnown RBP16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 TRMT13Q9NUP7 481 aaKnown RBP16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 MTMR10Q9NXD2 777 aa16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 DDX41Q9UJV9 622 aaKnown RBP16.36■□□□□ 0.21
CHRNA2-205ENST00000520600 SUPT20HL2P0C7V6 817 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 CHMP4BP1P59074 171 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 ADCK5Q3MIX3 580 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 ZNF697Q5TEC3 545 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 FAM109BQ6ICB4 259 aaPredicted RBP16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 NFRKBQ6P4R8 1299 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 DHX32Q7L7V1 743 aaKnown RBP16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 VSIG10LQ86VR7 867 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 MICU3Q86XE3 530 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 CMTR1Q8N1G2 835 aaKnown RBP16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 SRBD1Q8N5C6 995 aaKnown RBP16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 IL31RAQ8NI17 732 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 ZSCAN31Q96LW9 406 aaPredicted RBP16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 UMODL1Q5DID0 1318 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 ACRP10323 421 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 CCL23P55773 120 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 FGD1P98174 961 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 TMEM240Q5SV17 173 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 PSRC1Q6PGN9 363 aaPredicted RBP16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 SYNE3Q6ZMZ3 975 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 SGMS1Q86VZ5 419 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 PPP1R13LQ8WUF5 828 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 EMID1Q96A84 441 aaPredicted RBP16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 FAM161BQ96MY7 647 aa16.35■□□□□ 0.21
CHRNA2-205ENST00000520600 RGS20O76081 388 aa16.34■□□□□ 0.21
CHRNA2-205ENST00000520600 CYP2C9P11712 490 aa16.34■□□□□ 0.21
CHRNA2-205ENST00000520600 DGKDQ16760 1214 aa16.34■□□□□ 0.21
CHRNA2-205ENST00000520600 KCNV1Q6PIU1 500 aa16.34■□□□□ 0.21
CHRNA2-205ENST00000520600 C16orf59Q7L2K0 433 aa16.34■□□□□ 0.21
CHRNA2-205ENST00000520600 DHX37Q8IY37 1157 aaKnown RBP16.34■□□□□ 0.21
CHRNA2-205ENST00000520600 FANCBQ8NB91 859 aa16.34■□□□□ 0.21
CHRNA2-205ENST00000520600 SMARCC2Q8TAQ2 1214 aa16.34■□□□□ 0.21
CHRNA2-205ENST00000520600 CUL5Q93034 780 aa16.34■□□□□ 0.21
CHRNA2-205ENST00000520600 TCEANC2Q96MN5 208 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms