RNA–Protein interactions for RNA: ENST00000520480.5

R3HCC1-206, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 3

Gene R3HCC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-206ENST00000520480 COPS5Q92905 334 aa16.58■□□□□ 0.24
R3HCC1-206ENST00000520480 CUL5Q93034 780 aa16.58■□□□□ 0.24
R3HCC1-206ENST00000520480 JAKMIP1Q96N16 626 aaKnown RBP16.58■□□□□ 0.24
R3HCC1-206ENST00000520480 SNX14Q9Y5W7 946 aa16.58■□□□□ 0.24
R3HCC1-206ENST00000520480 MRVI1Q9Y6F6 885 aa16.58■□□□□ 0.24
R3HCC1-206ENST00000520480 GRIN2DO15399 1336 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 PIK3CDO00329 1044 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 TIMP1P01033 207 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 ITGB8P26012 769 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 RCAN1P53805 252 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 PSMC6P62333 389 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 ARHGAP1Q07960 439 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 RTN1Q16799 776 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 LY6KQ17RY6 165 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 BLOC1S2Q6QNY1 142 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 CCDC82Q8N4S0 544 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 SMARCC2Q8TAQ2 1214 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 DDX41Q9UJV9 622 aaKnown RBP16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 BRPF3Q9ULD4 1205 aa16.57■□□□□ 0.24
R3HCC1-206ENST00000520480 FRMPD4Q14CM0 1322 aa16.56■□□□□ 0.24
R3HCC1-206ENST00000520480 KLF18A0A0U1RQI7 1052 aa16.56■□□□□ 0.24
R3HCC1-206ENST00000520480 SOX1O00570 391 aaPredicted RBP16.56■□□□□ 0.24
R3HCC1-206ENST00000520480 CD4P01730 458 aa16.56■□□□□ 0.24
R3HCC1-206ENST00000520480 PSMA5P28066 241 aa16.56■□□□□ 0.24
R3HCC1-206ENST00000520480 FPGSQ05932 587 aa16.56■□□□□ 0.24
R3HCC1-206ENST00000520480 AFG1LQ8WV93 481 aa16.56■□□□□ 0.24
R3HCC1-206ENST00000520480 EMID1Q96A84 441 aaPredicted RBP16.56■□□□□ 0.24
R3HCC1-206ENST00000520480 SCN10AQ9Y5Y9 1956 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 GOLGA8AA7E2F4 631 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 GOLGA8BA8MQT2 603 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 STAM2O75886 525 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 MMP3P08254 477 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 TGFB3P10600 412 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 LAMC2Q13753 1193 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 GNPTABQ3T906 1256 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 MFSD5Q6N075 450 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 GPR153Q6NV75 609 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 IL31RAQ8NI17 732 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 ALDH8A1Q9H2A2 487 aaPredicted RBP16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 PSTPIP2Q9H939 334 aa16.55■□□□□ 0.24
R3HCC1-206ENST00000520480 CCDC196A0A1B0GTZ2 297 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 hCG_1642624A0A1W2PR95 340 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 MEIS2O14770 477 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 RGS20O76081 388 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 CPA1P15085 419 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 RPS6KB1P23443 525 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 DGKDQ16760 1214 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 XRRA1Q6P2D8 792 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 NFRKBQ6P4R8 1299 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 USP17L6PQ6QN14 398 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 Q6ZUG5 572 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 HEATR3Q7Z4Q2 680 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 TEX2Q8IWB9 1127 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 DHX37Q8IY37 1157 aaKnown RBP16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 FBXL16Q8N461 479 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 LRCH3Q96II8 777 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 TRPV6Q9H1D0 765 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 MYH7BA7E2Y1 1941 aa16.54■□□□□ 0.24
R3HCC1-206ENST00000520480 CNTNAP5Q8WYK1 1306 aa16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 B4GALT4O60513 344 aa16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 SUPT20HL2P0C7V6 817 aa16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 CASTP20810 708 aaKnown RBP16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 PTPN11Q06124 597 aaPredicted RBP16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 SHHQ15465 462 aa16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 NBPF20Q3BBV1 942 aa16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 TMEM199Q8N511 208 aa16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 PPTC7Q8NI37 304 aa16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 BRF1Q92994 677 aa16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 PPP1R12CQ9BZL4 782 aa16.53■□□□□ 0.24
R3HCC1-206ENST00000520480 METAP2P50579 478 aaKnown RBP eCLIP16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 MRPS9P82933 396 aaKnown RBP16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 APOBRQ0VD83 1088 aa16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 FUT2Q10981 343 aa16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 PPIGQ13427 754 aaKnown RBP eCLIP16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 FAM47CQ5HY64 1035 aa16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 C9orf50Q5SZB4 431 aa16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 CELF3Q5SZQ8 465 aaKnown RBP16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 PCNX4Q63HM2 1172 aa16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 PPP1R18Q6NYC8 613 aa16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 GPKOWQ92917 476 aaPredicted RBP eCLIP16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 INPP4AQ96PE3 977 aaPredicted RBP16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 USP26Q9BXU7 913 aa16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 HIPK3Q9H422 1215 aa16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 V9GY48 417 aaPredicted RBP16.52■□□□□ 0.24
R3HCC1-206ENST00000520480 SPDYE3A6NKU9 549 aa16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 hCG_1984214I3L0E3 225 aa16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 PPFIA4O75335 1185 aa16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 GGPS1O95749 300 aa16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 UBA1P22314 1058 aaKnown RBP16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 ICAM3P32942 547 aa16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 EPHB4P54760 987 aa16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 ZNF713Q8N859 430 aaPredicted RBP16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 NOC4LQ9BVI4 516 aaKnown RBP16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 MLXIPQ9HAP2 919 aa16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 FAM217BQ9NTX9 383 aaPredicted RBP16.51■□□□□ 0.23
R3HCC1-206ENST00000520480 TRMT13Q9NUP7 481 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms