RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 ANTXR2P58335 489 aa14.46□□□□□ -0.09
CSMD1-205ENST00000519623 CHST3Q7LGC8 479 aa14.46□□□□□ -0.09
CSMD1-205ENST00000519623 VSIG10LQ86VR7 867 aa14.46□□□□□ -0.09
CSMD1-205ENST00000519623 SAMD3Q8N6K7 520 aa14.46□□□□□ -0.09
CSMD1-205ENST00000519623 NCOA7Q8NI08 942 aa14.46□□□□□ -0.09
CSMD1-205ENST00000519623 PIGSQ96S52 555 aa14.46□□□□□ -0.09
CSMD1-205ENST00000519623 COL25A1Q9BXS0 654 aaPredicted RBP14.46□□□□□ -0.09
CSMD1-205ENST00000519623 MTIF3Q9H2K0 278 aaKnown RBP14.46□□□□□ -0.09
CSMD1-205ENST00000519623 IQCF3P0C7M6 154 aa14.45□□□□□ -0.1
CSMD1-205ENST00000519623 HOXA13P31271 388 aaPredicted RBP14.45□□□□□ -0.1
CSMD1-205ENST00000519623 WTAPQ15007 396 aa14.45□□□□□ -0.1
CSMD1-205ENST00000519623 MB21D2Q8IYB1 491 aaPredicted RBP14.45□□□□□ -0.1
CSMD1-205ENST00000519623 GBF1Q92538 1859 aa14.45□□□□□ -0.1
CSMD1-205ENST00000519623 EMID1Q96A84 441 aaPredicted RBP14.45□□□□□ -0.1
CSMD1-205ENST00000519623 CTAGE1Q96RT6 745 aa14.45□□□□□ -0.1
CSMD1-205ENST00000519623 PDCD2LQ9BRP1 358 aa14.45□□□□□ -0.1
CSMD1-205ENST00000519623 MSRAQ9UJ68 235 aa14.45□□□□□ -0.1
CSMD1-205ENST00000519623 YBX2Q9Y2T7 364 aaKnown RBP14.45□□□□□ -0.1
CSMD1-205ENST00000519623 SLC4A7Q9Y6M7 1214 aa14.45□□□□□ -0.1
CSMD1-205ENST00000519623 TET1Q8NFU7 2136 aa14.45□□□□□ -0.1
CSMD1-205ENST00000519623 PNMA6FA0A0J9YX94 578 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 ERICH2A1L162 156 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 PITPNM1O00562 1244 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 PFKMP08237 780 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 CASTP20810 708 aaKnown RBP14.44□□□□□ -0.1
CSMD1-205ENST00000519623 RABGGTBP53611 331 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 LAMC2Q13753 1193 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 RAB30Q15771 203 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 DGKDQ16760 1214 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 DEFB128Q7Z7B8 93 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 RALYLQ86SE5 291 aaKnown RBP14.44□□□□□ -0.1
CSMD1-205ENST00000519623 SESTD1Q86VW0 696 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 HOMER1Q86YM7 354 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 NKX2-4Q9H2Z4 354 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 RBM8AQ9Y5S9 174 aaKnown RBP14.44□□□□□ -0.1
CSMD1-205ENST00000519623 MRVI1Q9Y6F6 885 aa14.44□□□□□ -0.1
CSMD1-205ENST00000519623 MYCLP12524 364 aaPredicted RBP14.43□□□□□ -0.1
CSMD1-205ENST00000519623 HOXD8P13378 290 aaPredicted RBP14.43□□□□□ -0.1
CSMD1-205ENST00000519623 MYOGP15173 224 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 RFC2P35250 354 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 CHMP4BP1P59074 171 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 SP2Q02086 613 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 TRAF1Q13077 416 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 GPNMBQ14956 572 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 SART3Q15020 963 aaKnown RBP14.43□□□□□ -0.1
CSMD1-205ENST00000519623 PGM5Q15124 567 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 PTGISQ16647 500 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 TMEM67Q5HYA8 995 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 MYSM1Q5VVJ2 828 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 GDF6Q6KF10 455 aaPredicted RBP14.43□□□□□ -0.1
CSMD1-205ENST00000519623 USP38Q8NB14 1042 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 RETREG2Q8NC44 543 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 IL31RAQ8NI17 732 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 PRDM12Q9H4Q4 367 aa14.43□□□□□ -0.1
CSMD1-205ENST00000519623 GCOM1H8Y6P7 765 aaPredicted RBP14.42□□□□□ -0.1
CSMD1-205ENST00000519623 HAS3O00219 553 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 POLR2MP0CAP2 368 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 BFSP2Q13515 415 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 COL9A3Q14050 684 aaPredicted RBP14.42□□□□□ -0.1
CSMD1-205ENST00000519623 ADGRE1Q14246 886 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 CELF3Q5SZQ8 465 aaKnown RBP14.42□□□□□ -0.1
CSMD1-205ENST00000519623 KCNV1Q6PIU1 500 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 CATIPQ7Z7H3 387 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 DHX37Q8IY37 1157 aaKnown RBP14.42□□□□□ -0.1
CSMD1-205ENST00000519623 PPTC7Q8NI37 304 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 ZFP91Q96JP5 570 aaPredicted RBP14.42□□□□□ -0.1
CSMD1-205ENST00000519623 MAP3K14Q99558 947 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 LSG1Q9H089 658 aaKnown RBP14.42□□□□□ -0.1
CSMD1-205ENST00000519623 SLC28A3Q9HAS3 691 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 LY9Q9HBG7 655 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 HDAC6Q9UBN7 1215 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 PCDHA11Q9Y5I1 949 aa14.42□□□□□ -0.1
CSMD1-205ENST00000519623 VCANP13611 3396 aa14.41□□□□□ -0.1
CSMD1-205ENST00000519623 ZBBXA8MT70 800 aa14.41□□□□□ -0.1
CSMD1-205ENST00000519623 PPFIA4O75335 1185 aa14.41□□□□□ -0.1
CSMD1-205ENST00000519623 TGFB3P10600 412 aa14.41□□□□□ -0.1
CSMD1-205ENST00000519623 ATP2A2P16615 1042 aaKnown RBP14.41□□□□□ -0.1
CSMD1-205ENST00000519623 PSEN2P49810 448 aa14.41□□□□□ -0.1
CSMD1-205ENST00000519623 FCHSD1Q86WN1 690 aa14.41□□□□□ -0.1
CSMD1-205ENST00000519623 DHX38Q92620 1227 aaKnown RBP14.41□□□□□ -0.1
CSMD1-205ENST00000519623 GPKOWQ92917 476 aaPredicted RBP eCLIP14.41□□□□□ -0.1
CSMD1-205ENST00000519623 GAS2L1Q99501 681 aaPredicted RBP14.41□□□□□ -0.1
CSMD1-205ENST00000519623 MTA3Q9BTC8 594 aa14.41□□□□□ -0.1
CSMD1-205ENST00000519623 GTF2IRD1Q9UHL9 959 aa14.41□□□□□ -0.1
CSMD1-205ENST00000519623 NOD1Q9Y239 953 aa14.41□□□□□ -0.1
CSMD1-205ENST00000519623 CHD7Q9P2D1 2997 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 F2P00734 622 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 ACTN1P12814 892 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 SMARCA1P28370 1054 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 CCND2P30279 289 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 RBL2Q08999 1139 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 HSDL1Q3SXM5 330 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 ZNF654Q8IZM8 581 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 C7orf31Q8N865 590 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 CAGE1Q8TC20 777 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 ALG1Q9BT22 464 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 MYL10Q9BUA6 226 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 BCAS3Q9H6U6 928 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 TTC28Q96AY4 2481 aa14.4□□□□□ -0.1
CSMD1-205ENST00000519623 PRC1O43663 620 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms