RNA–Protein interactions for RNA: ENST00000519108.5

HDAC2-206, Transcript of histone deacetylase 2, humanhuman

TSL 2 BASIC

Gene HDAC2, Length 2,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-206ENST00000519108 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
HDAC2-206ENST00000519108 PIGSQ96S52 555 aa16.32■□□□□ 0.2
HDAC2-206ENST00000519108 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
HDAC2-206ENST00000519108 RIOX1Q9H6W3 641 aa16.32■□□□□ 0.2
HDAC2-206ENST00000519108 MLXIPQ9HAP2 919 aa16.32■□□□□ 0.2
HDAC2-206ENST00000519108 VAT1LQ9HCJ6 419 aa16.32■□□□□ 0.2
HDAC2-206ENST00000519108 SSU72P8A0A1W2PR75 194 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 EPHB6O15197 1021 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 NKRFO15226 690 aaKnown RBP eCLIP16.31■□□□□ 0.2
HDAC2-206ENST00000519108 PLCG2P16885 1265 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 PAFAH1B1P43034 410 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
HDAC2-206ENST00000519108 C15orf52Q6ZUT6 534 aaKnown RBP16.31■□□□□ 0.2
HDAC2-206ENST00000519108 FAM76AQ8TAV0 307 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 BAP1Q92560 729 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 RAD54LQ92698 747 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 LRRC1Q9BTT6 524 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 NUCKS1Q9H1E3 243 aaKnown RBP16.31■□□□□ 0.2
HDAC2-206ENST00000519108 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
HDAC2-206ENST00000519108 TSKSQ9UJT2 592 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 NRAPQ86VF7 1730 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 AHDC1Q5TGY3 1603 aaPredicted RBP16.31■□□□□ 0.2
HDAC2-206ENST00000519108 GPR75-ASB3A0A0A6YYF3 556 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 LRRC53A6NM62 1247 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 SEPT2Q15019 361 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 GRIK5Q16478 980 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 CCDC181Q5TID7 509 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 KRT79Q5XKE5 535 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 FOXR1Q6PIV2 292 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 GDAP1L1Q96MZ0 367 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 RNF14Q9UBS8 474 aa16.31■□□□□ 0.2
HDAC2-206ENST00000519108 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 VGLL3A8MV65 326 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 TRIM66O15016 1216 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 SHOX2O60902 331 aaPredicted RBP16.3■□□□□ 0.2
HDAC2-206ENST00000519108 BTDP43251 543 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 GRAPQ13588 217 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 ASTE1Q2TB18 679 aaPredicted RBP16.3■□□□□ 0.2
HDAC2-206ENST00000519108 GLE1Q53GS7 698 aaKnown RBP16.3■□□□□ 0.2
HDAC2-206ENST00000519108 PDXDC1Q6P996 788 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 LRRC55Q6ZSA7 311 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 DYMQ7RTS9 669 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 CACNA2D4Q7Z3S7 1137 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 GSPT2Q8IYD1 628 aaKnown RBP16.3■□□□□ 0.2
HDAC2-206ENST00000519108 CCDC24Q8N4L8 307 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 GRAPLQ8TC17 118 aaPredicted RBP16.3■□□□□ 0.2
HDAC2-206ENST00000519108 RIN2Q8WYP3 895 aaPredicted RBP16.3■□□□□ 0.2
HDAC2-206ENST00000519108 SYN2Q92777 582 aaPredicted RBP16.3■□□□□ 0.2
HDAC2-206ENST00000519108 NOX5Q96PH1 765 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 TMEM260Q9NX78 707 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 RSPH14Q9UHP6 348 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 SNED1Q8TER0 1413 aa16.3■□□□□ 0.2
HDAC2-206ENST00000519108 GOLGA6CA6NDK9 693 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 GOLGA8KD6RF30 607 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 OPA1O60313 960 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 GOLGA6DP0CG33 693 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 TNFRSF8P28908 595 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 ADCY7P51828 1080 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 EPHB4P54760 987 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 KCNQ4P56696 695 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 EHHADHQ08426 723 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 ALS2CLQ60I27 953 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 EMBQ6PCB8 327 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 SND1Q7KZF4 910 aaKnown RBP eCLIP16.29■□□□□ 0.2
HDAC2-206ENST00000519108 TEX11Q8IYF3 940 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 CEP95Q96GE4 821 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 DRC1Q96MC2 740 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 GOLGA6AQ9NYA3 693 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 RBAK-RBAKDNI3L0D1 243 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 SF3B2Q13435 895 aaKnown RBP16.29■□□□□ 0.2
HDAC2-206ENST00000519108 TMEM119Q4V9L6 283 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 NFRKBQ6P4R8 1299 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 GBP6Q6ZN66 633 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 SMIM5Q71RC9 77 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
HDAC2-206ENST00000519108 DDX12PQ92771 950 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 UBA5Q9GZZ9 404 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 LUC7LQ9NQ29 371 aaKnown RBP16.29■□□□□ 0.2
HDAC2-206ENST00000519108 STIM2Q9P246 746 aa16.29■□□□□ 0.2
HDAC2-206ENST00000519108 USP17L5A8MUK1 530 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 MAGEA9P43362 315 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 FKBP3Q00688 224 aaKnown RBP16.28■□□□□ 0.2
HDAC2-206ENST00000519108 PPFIA1Q13136 1202 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 SLF2Q8IX21 1173 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 MYOCDQ8IZQ8 938 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 SNX29Q8TEQ0 813 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 HDAC7Q8WUI4 952 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 SH3GL2Q99962 352 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 DMGDHQ9UI17 866 aaKnown RBP16.28■□□□□ 0.2
HDAC2-206ENST00000519108 SLC37A4O43826 429 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 NNTQ13423 1086 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 EZH2Q15910 746 aaKnown RBP16.28■□□□□ 0.2
HDAC2-206ENST00000519108 SLC9C1Q4G0N8 1177 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 ASPRV1Q53RT3 343 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 DNAJC21Q5F1R6 531 aaKnown RBP16.28■□□□□ 0.2
HDAC2-206ENST00000519108 PPP4R3AQ6IN85 833 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 CAVIN3Q969G5 261 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 FAM163AQ96GL9 167 aaPredicted RBP16.28■□□□□ 0.2
HDAC2-206ENST00000519108 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
HDAC2-206ENST00000519108 TANGO6Q9C0B7 1094 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms