RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 SHOX2O60902 331 aaPredicted RBP18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 GFPT1Q06210 699 aaPredicted RBP18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 SOGA3Q5TF21 947 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 KCNK18Q7Z418 384 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 LARP4BQ92615 738 aaKnown RBP18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 CEP95Q96GE4 821 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 RTFDC1Q9BY42 306 aaPredicted RBP18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 ANKIB1Q9P2G1 1089 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 TDP2O95551 362 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 LRRC41Q15345 812 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 CALCRLQ16602 461 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 SKIDA1Q1XH10 827 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 ASTE1Q2TB18 679 aaPredicted RBP18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 HAUS3Q68CZ6 603 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 C16orf86Q6ZW13 317 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 GUF1Q8N442 669 aaKnown RBP18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 MTMR8Q96EF0 704 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 SEC63Q9UGP8 760 aaKnown RBP18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 NARFQ9UHQ1 456 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 HYOU1Q9Y4L1 999 aa18.37■□□□□ 0.53
PCDHGA11-202ENST00000518882 PVALEFA0A1B0GWK0 134 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 GOLGA6CA6NDK9 693 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 USP17L5A8MUK1 530 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 GOLGA6DP0CG33 693 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 MAGEA1P43355 309 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 NFIXQ14938 502 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 CCDC70Q6NSX1 233 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 PTF1AQ7RTS3 328 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 FAM76AQ8TAV0 307 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 TLR10Q9BXR5 811 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 GOLGA6AQ9NYA3 693 aa18.36■□□□□ 0.53
PCDHGA11-202ENST00000518882 TCP1P17987 556 aaKnown RBP18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 SLC1A4P43007 532 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 KCNMA1Q12791 1236 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 HGSNATQ68CP4 663 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 CCDC84Q86UT8 332 aaPredicted RBP18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 TSEN2Q8NCE0 465 aaKnown RBP18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 NEDD1Q8NHV4 660 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 STK17AQ9UEE5 414 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 CNTNAP4Q9C0A0 1308 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 PJA2O43164 708 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 BUB1O43683 1085 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 FXR2P51116 673 aaKnown RBP eCLIP18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 GSTO1P78417 241 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 RASSF7Q02833 373 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 EHHADHQ08426 723 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 PDXDC1Q6P996 788 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 AMIGO3Q86WK7 504 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 RAD54LQ92698 747 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 COA7Q96BR5 231 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 ALS2CR12Q96Q35 445 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 EHD4Q9H223 541 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 ABCB11O95342 1321 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 SPATA31A5Q5VU36 1347 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 SPATA31A7Q8IWB4 1347 aa18.35■□□□□ 0.53
PCDHGA11-202ENST00000518882 BTDP43251 543 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 CORO7P57737 925 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 LRRC63Q05C16 580 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 ECM1Q16610 540 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 KLHDC7AQ5VTJ3 777 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 TPTE2Q6XPS3 522 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 TMC4Q7Z404 712 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 DDX12PQ92771 950 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 MS4A14Q96JA4 679 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 RBM12Q9NTZ6 932 aaKnown RBP18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 STIM2Q9P246 746 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 FRMPD2Q68DX3 1309 aaPredicted RBP18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 CCDC181Q5TID7 509 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 CDK5RAP3Q96JB5 506 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 SH3GL2Q99962 352 aa18.34■□□□□ 0.53
PCDHGA11-202ENST00000518882 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.53
PCDHGA11-202ENST00000518882 ESYT2A0FGR8 921 aa18.33■□□□□ 0.53
PCDHGA11-202ENST00000518882 MAGEA9P43362 315 aa18.33■□□□□ 0.53
PCDHGA11-202ENST00000518882 IRAK1P51617 712 aa18.33■□□□□ 0.53
PCDHGA11-202ENST00000518882 ORC2Q13416 577 aaPredicted RBP18.33■□□□□ 0.53
PCDHGA11-202ENST00000518882 SNX29Q8TEQ0 813 aa18.33■□□□□ 0.53
PCDHGA11-202ENST00000518882 RUBCNQ92622 972 aa18.33■□□□□ 0.53
PCDHGA11-202ENST00000518882 RIOX1Q9H6W3 641 aa18.33■□□□□ 0.53
PCDHGA11-202ENST00000518882 NLRC4Q9NPP4 1024 aa18.33■□□□□ 0.53
PCDHGA11-202ENST00000518882 TLR2O60603 784 aa18.33■□□□□ 0.52
PCDHGA11-202ENST00000518882 CACNA2D4Q7Z3S7 1137 aa18.33■□□□□ 0.52
PCDHGA11-202ENST00000518882 GJA10Q969M2 543 aa18.33■□□□□ 0.52
PCDHGA11-202ENST00000518882 TANGO6Q9C0B7 1094 aa18.33■□□□□ 0.52
PCDHGA11-202ENST00000518882 ZNF287Q9HBT7 754 aa18.33■□□□□ 0.52
PCDHGA11-202ENST00000518882 NHSQ6T4R5 1651 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 NOL4O94818 638 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 SMARCA1P28370 1054 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 EPHB4P54760 987 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 APBA1Q02410 837 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 TEX11Q8IYF3 940 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 RGL2O15211 777 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 FGFR1OPO95684 399 aaKnown RBP18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 PDHBP11177 359 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 TMEM266Q2M3C6 531 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 TMEM119Q4V9L6 283 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 FGFBP2Q9BYJ0 223 aa18.32■□□□□ 0.52
PCDHGA11-202ENST00000518882 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 GRIN2DO15399 1336 aa18.31■□□□□ 0.52
PCDHGA11-202ENST00000518882 ARFGEF1Q9Y6D6 1849 aa18.31■□□□□ 0.52
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