RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SH2D4AQ9H788 454 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 ATP8A2Q9NTI2 1148 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 NOVA2Q9UNW9 492 aaKnown RBP7.31□□□□□ -1.24
CPNE3-203ENST00000517490 KDM3AQ9Y4C1 1321 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 CLTAP09496 248 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 PRLRP16471 622 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 LSP1P33241 339 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 PLCB4Q15147 1175 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 FAM26FQ5R3K3 315 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 PPP4R3AQ6IN85 833 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 LRIG3Q6UXM1 1119 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 PARP9Q8IXQ6 854 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 ENAHQ8N8S7 591 aaPredicted RBP7.31□□□□□ -1.24
CPNE3-203ENST00000517490 CCT8L2Q96SF2 557 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 BRIP1Q9BX63 1249 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 DPH5Q9H2P9 285 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 COL4A3BPQ9Y5P4 624 aa7.31□□□□□ -1.24
CPNE3-203ENST00000517490 LRRC53A6NM62 1247 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 MPHOSPH10O00566 681 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 CTNND1O60716 968 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 PALMO75781 387 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 LUC7L3O95232 432 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 BMP6P22004 513 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 GCKP35557 465 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 GUCY1A3Q02108 690 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 SLMAPQ14BN4 828 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 TMED8Q6PL24 325 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 HS2ST1Q7LGA3 356 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 NELFCDQ8IXH7 590 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 RASGRP4Q8TDF6 673 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 CUL5Q93034 780 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 TAF1DQ9H5J8 278 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 CEP83Q9Y592 693 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 CACNA1FO60840 1977 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 FAM205CA6NFA0 338 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 LDHBP07195 334 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 PLCG2P16885 1265 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 HIBADHP31937 336 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 DHX9Q08211 1270 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 HAUS3Q68CZ6 603 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 KDM7AQ6ZMT4 941 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 SYCP3Q8IZU3 236 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 INTS9Q9NV88 658 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 CEP72Q9P209 647 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 CPSF2Q9P2I0 782 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 MYO5BQ9ULV0 1848 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 RHOBTB3O94955 611 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 PPP2R2AP63151 447 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 ITIH3Q06033 890 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 UBE4AQ14139 1066 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 TBC1D31Q96DN5 1066 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 PAIP2Q9BPZ3 127 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 TMEM110-MUSTN1A8MSY1 372 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 NCK2O43639 380 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 PCK1P35558 622 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 SSR1P43307 286 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 CDK17Q00537 523 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 SEPT2Q15019 361 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 HIBCHQ6NVY1 386 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 CEP128Q6ZU80 1094 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 SH2D3CQ8N5H7 860 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 MICAL1Q8TDZ2 1067 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 U2AF1L4Q8WU68 220 aaKnown RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 ZIM3Q96PE6 472 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 RAB3IPQ96QF0 476 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 UBXN6Q9BZV1 441 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 GLT8D2Q9H1C3 349 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 AGPAT5Q9NUQ2 364 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 PANK4Q9NVE7 773 aa7.3□□□□□ -1.24
CPNE3-203ENST00000517490 ARMCX3Q9UH62 379 aaPredicted RBP7.3□□□□□ -1.24
CPNE3-203ENST00000517490 ADAMTSL3P82987 1691 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 FAM208AQ9UK61 1670 aaKnown RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 SYF2O95926 243 aaKnown RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 XRCC5P13010 732 aaKnown RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 HERVK_113P62684 666 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 TSNAXIP1Q2TAA8 658 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 KRT26Q7Z3Y9 468 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 C3orf20Q8ND61 904 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 SMCR8Q8TEV9 937 aaPredicted RBP7.29□□□□□ -1.24
CPNE3-203ENST00000517490 TBC1D7Q9P0N9 293 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 FER1L4A9Z1Z3 1794 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 PVALEFA0A1B0GWK0 134 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 LRRC10BA6NIK2 292 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 SUN1O94901 812 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 TRIM37O94972 964 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 FAM13AO94988 1023 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 FAM107AO95990 144 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 CSF1RP07333 972 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 STAT1P42224 750 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 CASP7P55210 303 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 CHRNDQ07001 517 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 ADAM9Q13443 819 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 PTGISQ16647 500 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 C6orf163Q5TEZ5 329 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 NAA35Q5VZE5 725 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 UNC13DQ70J99 1090 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 PROM2Q8N271 834 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 TCP11Q8WWU5 503 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 NLRP3Q96P20 1036 aa7.29□□□□□ -1.24
CPNE3-203ENST00000517490 CCSER1Q9C0I3 900 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms