RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 STOX1Q6ZVD7 989 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 DGKHQ86XP1 1220 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 HERC6Q8IVU3 1022 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 MICALL1Q8N3F8 863 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SCFD2Q8WU76 684 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ATXN2LQ8WWM7 1075 aaKnown RBP9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 RILPL2Q969X0 211 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ZSCAN10Q96SZ4 725 aaPredicted RBP9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 GAS2L1Q99501 681 aaPredicted RBP9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 EPHX3Q9H6B9 360 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 C11orf16Q9NQ32 467 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 POLR3EQ9NVU0 708 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 THEGQ9P2T0 379 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 HDAC6Q9UBN7 1215 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ADD3Q9UEY8 706 aaKnown RBP9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 MAD2L2Q9UI95 211 aa9.71□□□□□ -0.86
SCARNA20.3-201ENST00000516913 BAZ2BQ9UIF8 2168 aaKnown RBP9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 LOC102724159A0A0B4J2E5 919 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 TRIM6-TRIM34B2RNG4 842 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ZEB2O60315 1214 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 LGR5O75473 907 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 CXCL10P02778 98 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 NR3C2P08235 984 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ZNF286BP0CG31 522 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 EIF2AK2P19525 551 aaKnown RBP9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 HOXA13P31271 388 aaPredicted RBP9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 CPT1AP50416 773 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 HSD17B4P51659 736 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 CHMP4BP1P59074 171 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 WDR5P61964 334 aaKnown RBP9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 GHRHRQ02643 423 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PWP2Q15269 919 aaKnown RBP9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PTGISQ16647 500 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SESTD1Q86VW0 696 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 CHD1LQ86WJ1 897 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 DNERQ8NFT8 737 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ARNTL2Q8WYA1 636 aa9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 UHRF1Q96T88 793 aaPredicted RBP9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SUPT16HQ9Y5B9 1047 aaKnown RBP9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 TRIP12Q14669 1992 aaPredicted RBP9.7□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PITPNM1O00562 1244 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 CKBP12277 381 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ANTXR2P58335 489 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 MRPS5P82675 430 aaKnown RBP9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 RBL2Q08999 1139 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 HSDL1Q3SXM5 330 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 TMEM67Q5HYA8 995 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ZNF618Q5T7W0 954 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 MYSM1Q5VVJ2 828 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 RPUSD2Q8IZ73 545 aaKnown RBP9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 RMDN3Q96TC7 470 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 C16orf70Q9BSU1 422 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PXMP2Q9NR77 195 aa9.69□□□□□ -0.86
SCARNA20.3-201ENST00000516913 NKRFO15226 690 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 HOXC8P31273 242 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PSEN2P49810 448 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 MRPS9P82933 396 aaKnown RBP9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PTPN11Q06124 597 aaPredicted RBP9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PPP4R3BQ5MIZ7 849 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 GPATCH4Q5T3I0 446 aaKnown RBP9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 VSIG10LQ86VR7 867 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 GDPD5Q8WTR4 605 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ESR2Q92731 530 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SYMPKQ92797 1274 aaKnown RBP9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 EMID1Q96A84 441 aaPredicted RBP9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PIGSQ96S52 555 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PDCD2LQ9BRP1 358 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ALG1Q9BT22 464 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SEZ6LQ9BYH1 1024 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SUGCTQ9HAC7 445 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 GTF2IRD1Q9UHL9 959 aa9.68□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ABCB11O95342 1321 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 LINC01553A4QN01 128 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 ZNF213O14771 459 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 F2P00734 622 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 CFBP00751 764 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 GH1P01241 217 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 CYP21A2P08686 494 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 LINC00271P0C7V0 271 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SUPT20HL2P0C7V6 817 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SELPP16109 830 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 TROAPQ12815 778 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 FAM117BQ6P1L5 589 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 SKAP1Q86WV1 359 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 FBXO11Q86XK2 927 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 TICAM2Q86XR7 235 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 PHOSPHO2Q8TCD6 241 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 NSUN6Q8TEA1 469 aaKnown RBP9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 DSCC1Q9BVC3 393 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 FTOQ9C0B1 505 aaKnown RBP eCLIP9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 MTUS1Q9ULD2 1270 aa9.67□□□□□ -0.86
SCARNA20.3-201ENST00000516913 USP34Q70CQ2 3546 aa9.66□□□□□ -0.86
SCARNA20.3-201ENST00000516913 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.66□□□□□ -0.86
SCARNA20.3-201ENST00000516913 KLRF2D3W0D1 207 aa9.66□□□□□ -0.86
SCARNA20.3-201ENST00000516913 EIF3JO75822 258 aaKnown RBP9.66□□□□□ -0.86
SCARNA20.3-201ENST00000516913 GJB5O95377 273 aa9.66□□□□□ -0.86
SCARNA20.3-201ENST00000516913 UBA1P22314 1058 aaKnown RBP9.66□□□□□ -0.86
SCARNA20.3-201ENST00000516913 RFC2P35250 354 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms