RNA–Protein interactions for RNA: ENST00000516400.1

RNU1-48P-201, Transcript of RNA, U1 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU1-48P, Length 162 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-48P-201ENST00000516400 SCNM1Q9BWG6 230 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 ABHD16BQ9H3Z7 469 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 SEMA4GQ9NTN9 838 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 TMOD4Q9NZQ9 345 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 WNT16Q9UBV4 365 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 FBXO3Q9UK99 471 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 FBXO4Q9UKT5 387 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 ZNF214Q9UL59 606 aaPredicted RBP3□□□□□ -1.93
RNU1-48P-201ENST00000516400 ZBTB21Q9ULJ3 1066 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 DUSP12Q9UNI6 340 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 SMG5Q9UPR3 1016 aaKnown RBP3□□□□□ -1.93
RNU1-48P-201ENST00000516400 MAP3K2Q9Y2U5 619 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 Q9Y3F1 56 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 RIPK3Q9Y572 518 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 PCDHGA2Q9Y5H1 932 aa3□□□□□ -1.93
RNU1-48P-201ENST00000516400 CACNA1EQ15878 2313 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 PI4KAP42356 2102 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 PTPRDP23468 1912 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 CLSPNQ9HAW4 1339 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 SPG11Q96JI7 2443 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 PI4KAP2A4QPH2 592 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 J3QKU1 62 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 NARSO43776 548 aaKnown RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 PLIN1O60240 522 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 ZEB2O60315 1214 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 N4BP1O75113 896 aaKnown RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 PDE8BO95263 885 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 ITGB1P05556 798 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 DCNP07585 359 aaKnown RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 SUPT20HL2P0C7V6 817 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 NDUFV1P49821 464 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 RIPPLY3P57055 190 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 STARD6P59095 220 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 FSCN1Q16658 493 aaKnown RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 LRRC24Q50LG9 513 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 PLEKHG4Q58EX7 1191 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 COLEC12Q5KU26 742 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 DUSP27Q5VZP5 1158 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 ANKRD54Q6NXT1 300 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 ZC3H14Q6PJT7 736 aaKnown RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 PI4KAP1Q8N8J0 262 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 DBF4BQ8NFT6 615 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 WDR66Q8TBY9 1149 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 AFAP1L1Q8TED9 768 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 DDX1Q92499 740 aaKnown RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 P2RX5Q93086 422 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 VTI1AQ96AJ9 217 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 HINFPQ9BQA5 517 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 ZBED2Q9BTP6 218 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 RPAP3Q9H6T3 665 aaPredicted RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 SCUBE2Q9NQ36 999 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 PDGFCQ9NRA1 345 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 AAASQ9NRG9 546 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 SLC5A4Q9NY91 659 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 HOXC10Q9NYD6 342 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 NCDNQ9UBB6 729 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 LIMD1Q9UGP4 676 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 SRPK3Q9UPE1 567 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 TRIM35Q9UPQ4 493 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 MSRB2Q9Y3D2 182 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 KNSTRNQ9Y448 316 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 DDX49Q9Y6V7 483 aaKnown RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 ADAMTS9Q9P2N4 1935 aa2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 PDCD11Q14690 1871 aaKnown RBP2.99□□□□□ -1.93
RNU1-48P-201ENST00000516400 DCHS2Q6V1P9 2916 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 RBM47A0AV96 593 aaKnown RBP2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 FSCN2O14926 492 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 PER2O15055 1255 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 ATXN7O15265 892 aaPredicted RBP2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 GDF11O95390 407 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 SLC25A27O95847 323 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 NTRK1P04629 796 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 RETP07949 1114 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 CKBP12277 381 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 SELPP16109 830 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 KCNJ6P48051 423 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 NRIP1P48552 1158 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 ERVFC1P60507 584 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 EIF4G2P78344 907 aaKnown RBP eCLIP2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 PTPN11Q06124 597 aaPredicted RBP2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 IFIT5Q13325 482 aaKnown RBP2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 IKBKEQ14164 716 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 DUSP6Q16828 381 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 NFRKBQ6P4R8 1299 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 LMBR1LQ6UX01 489 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 MAMSTRQ6ZN01 415 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 G2E3Q7L622 706 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 ZNF605Q86T29 641 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 SESTD1Q86VW0 696 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 TMC8Q8IU68 726 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 FOXP4Q8IVH2 680 aaPredicted RBP2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 CCDC144CPQ8IYA2 1237 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 SIX5Q8N196 739 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 LSM14AQ8ND56 463 aaKnown RBP2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 MORC4Q8TE76 937 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 SLC39A7Q92504 469 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 KAT2BQ92831 832 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 ATG4CQ96DT6 458 aa2.98□□□□□ -1.93
RNU1-48P-201ENST00000516400 FTOQ9C0B1 505 aaKnown RBP eCLIP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms