RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 RBM8AQ9Y5S9 174 aaKnown RBP15.47■□□□□ 0.07
PFDN1-206ENST00000514611 MRVI1Q9Y6F6 885 aa15.47■□□□□ 0.07
PFDN1-206ENST00000514611 ZBBXA8MT70 800 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 SORBS3O60504 671 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 MYCLP12524 364 aaPredicted RBP15.46■□□□□ 0.07
PFDN1-206ENST00000514611 RABGGTBP53611 331 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 TMEM67Q5HYA8 995 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 USP38Q8NB14 1042 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 PIBF1Q8WXW3 757 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 KAT2BQ92831 832 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 MAP4K1Q92918 833 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 PDCD2LQ9BRP1 358 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 COL25A1Q9BXS0 654 aaPredicted RBP15.46■□□□□ 0.07
PFDN1-206ENST00000514611 NKX2-4Q9H2Z4 354 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 RIOX1Q9H6W3 641 aa15.46■□□□□ 0.07
PFDN1-206ENST00000514611 CHD9Q3L8U1 2897 aa15.46■□□□□ 0.06
PFDN1-206ENST00000514611 RBAK-RBAKDNI3L0D1 243 aa15.45■□□□□ 0.06
PFDN1-206ENST00000514611 EIF3JO75822 258 aaKnown RBP15.45■□□□□ 0.06
PFDN1-206ENST00000514611 RGS20O76081 388 aa15.45■□□□□ 0.06
PFDN1-206ENST00000514611 ZNF286BP0CG31 522 aa15.45■□□□□ 0.06
PFDN1-206ENST00000514611 PTPN11Q06124 597 aaPredicted RBP15.45■□□□□ 0.06
PFDN1-206ENST00000514611 COL9A3Q14050 684 aaPredicted RBP15.45■□□□□ 0.06
PFDN1-206ENST00000514611 SART3Q15020 963 aaKnown RBP15.45■□□□□ 0.06
PFDN1-206ENST00000514611 PGM5Q15124 567 aa15.45■□□□□ 0.06
PFDN1-206ENST00000514611 RAB30Q15771 203 aa15.45■□□□□ 0.06
PFDN1-206ENST00000514611 RPUSD2Q8IZ73 545 aaKnown RBP15.45■□□□□ 0.06
PFDN1-206ENST00000514611 ZFP91Q96JP5 570 aaPredicted RBP15.45■□□□□ 0.06
PFDN1-206ENST00000514611 CTAGE1Q96RT6 745 aa15.45■□□□□ 0.06
PFDN1-206ENST00000514611 MYL10Q9BUA6 226 aa15.45■□□□□ 0.06
PFDN1-206ENST00000514611 MYH6P13533 1939 aa15.45■□□□□ 0.06
PFDN1-206ENST00000514611 CHD7Q9P2D1 2997 aa15.45■□□□□ 0.06
PFDN1-206ENST00000514611 TANC1Q9C0D5 1861 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 PITPNM1O00562 1244 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 IQCF3P0C7M6 154 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 PTGISQ16647 500 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 GDF6Q6KF10 455 aaPredicted RBP15.44■□□□□ 0.06
PFDN1-206ENST00000514611 CATIPQ7Z7H3 387 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 FCHSD1Q86WN1 690 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 SKAP1Q86WV1 359 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 IGDCC4Q8TDY8 1250 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 EMID1Q96A84 441 aaPredicted RBP15.44■□□□□ 0.06
PFDN1-206ENST00000514611 PRDM12Q9H4Q4 367 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 LY9Q9HBG7 655 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 MSRAQ9UJ68 235 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 NOD1Q9Y239 953 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 SLC4A7Q9Y6M7 1214 aa15.44■□□□□ 0.06
PFDN1-206ENST00000514611 GCOM1H8Y6P7 765 aaPredicted RBP15.43■□□□□ 0.06
PFDN1-206ENST00000514611 PFKMP08237 780 aa15.43■□□□□ 0.06
PFDN1-206ENST00000514611 POLR2MP0CAP2 368 aa15.43■□□□□ 0.06
PFDN1-206ENST00000514611 MYOGP15173 224 aa15.43■□□□□ 0.06
PFDN1-206ENST00000514611 CASTP20810 708 aaKnown RBP15.43■□□□□ 0.06
PFDN1-206ENST00000514611 DGKDQ16760 1214 aa15.43■□□□□ 0.06
PFDN1-206ENST00000514611 SESTD1Q86VW0 696 aa15.43■□□□□ 0.06
PFDN1-206ENST00000514611 ZNF654Q8IZM8 581 aa15.43■□□□□ 0.06
PFDN1-206ENST00000514611 PPTC7Q8NI37 304 aa15.43■□□□□ 0.06
PFDN1-206ENST00000514611 GPKOWQ92917 476 aaPredicted RBP eCLIP15.43■□□□□ 0.06
PFDN1-206ENST00000514611 LSG1Q9H089 658 aaKnown RBP15.43■□□□□ 0.06
PFDN1-206ENST00000514611 MAP3K20Q9NYL2 800 aaKnown RBP15.43■□□□□ 0.06
PFDN1-206ENST00000514611 PNMA6FA0A0J9YX94 578 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 F2P00734 622 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 ATP2A2P16615 1042 aaKnown RBP15.42■□□□□ 0.06
PFDN1-206ENST00000514611 UBA1P22314 1058 aaKnown RBP15.42■□□□□ 0.06
PFDN1-206ENST00000514611 PSEN2P49810 448 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 BFSP2Q13515 415 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 LAMC2Q13753 1193 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 ADGRE1Q14246 886 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 VSIG10LQ86VR7 867 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 DHX37Q8IY37 1157 aaKnown RBP15.42■□□□□ 0.06
PFDN1-206ENST00000514611 DHX38Q92620 1227 aaKnown RBP15.42■□□□□ 0.06
PFDN1-206ENST00000514611 GAS2L1Q99501 681 aaPredicted RBP15.42■□□□□ 0.06
PFDN1-206ENST00000514611 ALG1Q9BT22 464 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 HDAC6Q9UBN7 1215 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 GTF2IRD1Q9UHL9 959 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 SCN5AQ14524 2016 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 KIAA1217Q5T5P2 1943 aa15.42■□□□□ 0.06
PFDN1-206ENST00000514611 PRC1O43663 620 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 DDAH1O94760 285 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 PLEKHA8P1O95397 391 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 GGPS1O95749 300 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 RXRAP19793 462 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 CCND2P30279 289 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 RFC2P35250 354 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 SP2Q02086 613 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 MFSD10Q14728 455 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 KIAA0753Q2KHM9 967 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 HSDL1Q3SXM5 330 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 MYSM1Q5VVJ2 828 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 PPP2R2DQ66LE6 453 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 CASC1Q6TDU7 716 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 RETREG2Q8NC44 543 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 ESYT1Q9BSJ8 1104 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 KATNAL1Q9BW62 490 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 SLC28A3Q9HAS3 691 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 GBF1Q92538 1859 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 FRMPD4Q14CM0 1322 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 XIRP2A4UGR9 3374 aa15.41■□□□□ 0.06
PFDN1-206ENST00000514611 HAS3O00219 553 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 SH2B2O14492 632 aaPredicted RBP15.4■□□□□ 0.06
PFDN1-206ENST00000514611 SLC27A2O14975 620 aa15.4■□□□□ 0.06
PFDN1-206ENST00000514611 GPNMBQ14956 572 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms