RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 Q9Y3F1 56 aa9.54□□□□□ -0.88
CCL28-204ENST00000514421 DDX49Q9Y6V7 483 aaKnown RBP9.54□□□□□ -0.88
CCL28-204ENST00000514421 TCHHQ07283 1943 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 STXBP3O00186 592 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 DNM1LO00429 736 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 DYNC1LI2O43237 492 aaPredicted RBP9.53□□□□□ -0.88
CCL28-204ENST00000514421 TRAK2O60296 914 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 CDKL5O76039 1030 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 FOSP01100 380 aaPredicted RBP9.53□□□□□ -0.88
CCL28-204ENST00000514421 MYCLP12524 364 aaPredicted RBP9.53□□□□□ -0.88
CCL28-204ENST00000514421 SMPD1P17405 629 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 EIF2AK2P19525 551 aaKnown RBP9.53□□□□□ -0.88
CCL28-204ENST00000514421 ADCYAP1R1P41586 468 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 NAPAP54920 295 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 GJA9P57773 515 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 SCRN1Q12765 414 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 LRRC41Q15345 812 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 PKN1Q16512 942 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 GJC2Q5T442 439 aaPredicted RBP9.53□□□□□ -0.88
CCL28-204ENST00000514421 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 FBXO16Q8IX29 292 aaPredicted RBP9.53□□□□□ -0.88
CCL28-204ENST00000514421 SCFD2Q8WU76 684 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 CCDC12Q8WUD4 166 aaPredicted RBP9.53□□□□□ -0.88
CCL28-204ENST00000514421 LLPHQ9BRT6 129 aaKnown RBP9.53□□□□□ -0.88
CCL28-204ENST00000514421 HTATIP2Q9BUP3 242 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 WDR11Q9BZH6 1224 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 AP5M1Q9H0R1 490 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 C11orf49Q9H6J7 331 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 RIC8AQ9NPQ8 531 aa9.53□□□□□ -0.88
CCL28-204ENST00000514421 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
CCL28-204ENST00000514421 ZNF236Q9UL36 1845 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.52□□□□□ -0.89
CCL28-204ENST00000514421 SPDYE3A6NKU9 549 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 KBTBD13C9JR72 458 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 GOLGA6L22H0YM25 854 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 NKRFO15226 690 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCL28-204ENST00000514421 PPFIA3O75145 1194 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 ADAMTS4O75173 837 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 STAM2O75886 525 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 DEXIO95424 95 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 PGK1P00558 417 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 COL6A1P12109 1028 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 GNA11P29992 359 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 CCND2P30279 289 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 CLCN6P51797 869 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 NKX3-2P78367 333 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 TTLL4Q14679 1199 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 PGM5Q15124 567 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 DUSP28Q4G0W2 176 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 MCTP2Q6DN12 878 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 TYW1BQ6NUM6 668 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 XRRA1Q6P2D8 792 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 KCNV1Q6PIU1 500 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 SEPT14Q6ZU15 432 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 PCSK9Q8NBP7 692 aaKnown RBP9.52□□□□□ -0.89
CCL28-204ENST00000514421 KLHDC9Q8NEP7 349 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 DIS3LQ8TF46 1054 aaKnown RBP9.52□□□□□ -0.89
CCL28-204ENST00000514421 GTF3C6Q969F1 213 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 TSEN34Q9BSV6 310 aaKnown RBP9.52□□□□□ -0.89
CCL28-204ENST00000514421 SENP6Q9GZR1 1112 aaPredicted RBP9.52□□□□□ -0.89
CCL28-204ENST00000514421 UPF3AQ9H1J1 476 aaKnown RBP9.52□□□□□ -0.89
CCL28-204ENST00000514421 C6orf50Q9HD87 102 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 SH3GLB2Q9NR46 395 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 LMBRD1Q9NUN5 540 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 PCDHA6Q9UN73 950 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 PCDHA8Q9Y5H6 950 aa9.52□□□□□ -0.89
CCL28-204ENST00000514421 ESYT2A0FGR8 921 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 ZEB2O60315 1214 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 C6orf222P0C671 652 aaPredicted RBP9.51□□□□□ -0.89
CCL28-204ENST00000514421 ZSCAN22P10073 491 aaPredicted RBP9.51□□□□□ -0.89
CCL28-204ENST00000514421 TXNP10599 105 aaKnown RBP9.51□□□□□ -0.89
CCL28-204ENST00000514421 TGFB3P10600 412 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 PDCP20941 246 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 SYT1P21579 422 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 DEKP35659 375 aaKnown RBP9.51□□□□□ -0.89
CCL28-204ENST00000514421 ADCY7P51828 1080 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 KCNA10Q16322 511 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 KLHL40Q2TBA0 621 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 GNASQ5JWF2 1037 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 CCDC62Q6P9F0 684 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 FAM177A1Q8N128 213 aaPredicted RBP9.51□□□□□ -0.89
CCL28-204ENST00000514421 NECAB1Q8N987 351 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 TMEM87AQ8NBN3 555 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 DPF3Q92784 378 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 ZMYND12Q9H0C1 365 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 EHMT1Q9H9B1 1298 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 SMC3Q9UQE7 1217 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 PDE4DIPQ5VU43 2346 aa9.51□□□□□ -0.89
CCL28-204ENST00000514421 MYH15Q9Y2K3 1946 aa9.5□□□□□ -0.89
CCL28-204ENST00000514421 MOXD2PA6NHM9 499 aa9.5□□□□□ -0.89
CCL28-204ENST00000514421 ADCY6O43306 1168 aa9.5□□□□□ -0.89
CCL28-204ENST00000514421 STX6O43752 255 aa9.5□□□□□ -0.89
CCL28-204ENST00000514421 RGS20O76081 388 aa9.5□□□□□ -0.89
CCL28-204ENST00000514421 CTDNEP1O95476 244 aa9.5□□□□□ -0.89
CCL28-204ENST00000514421 CST5P28325 142 aaPredicted RBP9.5□□□□□ -0.89
CCL28-204ENST00000514421 GJB2P29033 226 aa9.5□□□□□ -0.89
CCL28-204ENST00000514421 NLRP5P59047 1200 aa9.5□□□□□ -0.89
CCL28-204ENST00000514421 MRPS9P82933 396 aaKnown RBP9.5□□□□□ -0.89
CCL28-204ENST00000514421 UBE2SQ16763 222 aa9.5□□□□□ -0.89
CCL28-204ENST00000514421 BRDTQ58F21 947 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms