RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 UPF3AQ9H1J1 476 aaKnown RBP9.43□□□□□ -0.9
NEDD4-210ENST00000513957 C11orf49Q9H6J7 331 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 XPNPEP3Q9NQH7 507 aa9.43□□□□□ -0.9
NEDD4-210ENST00000513957 RBM47A0AV96 593 aaKnown RBP9.42□□□□□ -0.9
NEDD4-210ENST00000513957 ESYT2A0FGR8 921 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 MOXD2PA6NHM9 499 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 CDKL5O76039 1030 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 COL6A1P12109 1028 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 CPA1P15085 419 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 TAL1P17542 331 aaPredicted RBP9.42□□□□□ -0.9
NEDD4-210ENST00000513957 PDIA3P30101 505 aaKnown RBP9.42□□□□□ -0.9
NEDD4-210ENST00000513957 RBM25P49756 843 aaKnown RBP9.42□□□□□ -0.9
NEDD4-210ENST00000513957 AKAP17AQ02040 695 aaKnown RBP9.42□□□□□ -0.9
NEDD4-210ENST00000513957 STXBP2Q15833 593 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 PFKFB3Q16875 520 aaPredicted RBP9.42□□□□□ -0.9
NEDD4-210ENST00000513957 CCDC144BQ3MJ40 725 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 TRIM22Q8IYM9 498 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 PCSK9Q8NBP7 692 aaKnown RBP9.42□□□□□ -0.9
NEDD4-210ENST00000513957 SCFD2Q8WU76 684 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 EHMT1Q9H9B1 1298 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 PXMP2Q9NR77 195 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 FAM217BQ9NTX9 383 aaPredicted RBP9.42□□□□□ -0.9
NEDD4-210ENST00000513957 BARHL2Q9NY43 387 aa9.42□□□□□ -0.9
NEDD4-210ENST00000513957 NAP1L2Q9ULW6 460 aaPredicted RBP9.42□□□□□ -0.9
NEDD4-210ENST00000513957 TNRC18O15417 2968 aaPredicted RBP9.41□□□□□ -0.9
NEDD4-210ENST00000513957 STK36Q9NRP7 1315 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 SYNRGQ9UMZ2 1314 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 DPYSL4O14531 572 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 CPLX1O14810 134 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 PRPF3O43395 683 aaKnown RBP9.41□□□□□ -0.9
NEDD4-210ENST00000513957 ZEB2O60315 1214 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 ADAMTS4O75173 837 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 EIF3JO75822 258 aaKnown RBP9.41□□□□□ -0.9
NEDD4-210ENST00000513957 TGFB3P10600 412 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 SCG2P13521 617 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 CDC27P30260 824 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 GJA9P57773 515 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 TNFAIP2Q03169 654 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 TTLL4Q14679 1199 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 LRRC41Q15345 812 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 NTRK3Q16288 839 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 DUSP28Q4G0W2 176 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 PRAMEF19Q5SWL8 479 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 C1orf53Q5VUE5 145 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 TAPT1Q6NXT6 567 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 HEATR3Q7Z4Q2 680 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 CCDC148Q8NFR7 591 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 SMARCC2Q8TAQ2 1214 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 PAWRQ96IZ0 340 aaKnown RBP9.41□□□□□ -0.9
NEDD4-210ENST00000513957 PDCD2LQ9BRP1 358 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 SEZ6LQ9BYH1 1024 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 PSTPIP2Q9H939 334 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 SH3GLB2Q9NR46 395 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 COL20A1Q9P218 1284 aa9.41□□□□□ -0.9
NEDD4-210ENST00000513957 GNEQ9Y223 722 aaKnown RBP9.41□□□□□ -0.9
NEDD4-210ENST00000513957 SPDYE3A6NKU9 549 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 MEIS2O14770 477 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 CABYRO75952 493 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 SEC24BO95487 1268 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 FOSP01100 380 aaPredicted RBP9.4□□□□□ -0.9
NEDD4-210ENST00000513957 NR3C2P08235 984 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 GNA11P29992 359 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 CCND2P30279 289 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 ADD1P35611 737 aaKnown RBP9.4□□□□□ -0.9
NEDD4-210ENST00000513957 CPT1AP50416 773 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 NAPAP54920 295 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 AP3B2Q13367 1082 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 PGM5Q15124 567 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 GNPTABQ3T906 1256 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 BRDTQ58F21 947 aaPredicted RBP9.4□□□□□ -0.9
NEDD4-210ENST00000513957 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 TLK2Q86UE8 772 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 RAB11FIP4Q86YS3 637 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 FBXO16Q8IX29 292 aaPredicted RBP9.4□□□□□ -0.9
NEDD4-210ENST00000513957 CMTR1Q8N1G2 835 aaKnown RBP9.4□□□□□ -0.9
NEDD4-210ENST00000513957 KLHDC9Q8NEP7 349 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 BICD2Q8TD16 824 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 TAAR1Q96RJ0 339 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 C22orf23Q9BZE7 217 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 WDR11Q9BZH6 1224 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 SLKQ9H2G2 1235 aaPredicted RBP9.4□□□□□ -0.9
NEDD4-210ENST00000513957 RIC8AQ9NPQ8 531 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 PHF24Q9UPV7 400 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 NR2E3Q9Y5X4 410 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 V9GY48 417 aaPredicted RBP9.4□□□□□ -0.9
NEDD4-210ENST00000513957 SCN10AQ9Y5Y9 1956 aa9.4□□□□□ -0.9
NEDD4-210ENST00000513957 ELP1O95163 1332 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 MROH7Q68CQ1 1323 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 STXBP3O00186 592 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 KPNA6O60684 536 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 PFKFB2O60825 505 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 DEXIO95424 95 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 EIF2AK2P19525 551 aaKnown RBP9.39□□□□□ -0.91
NEDD4-210ENST00000513957 HOXA13P31271 388 aaPredicted RBP9.39□□□□□ -0.91
NEDD4-210ENST00000513957 ADCYAP1R1P41586 468 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 ADCY7P51828 1080 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 NEK4P51957 841 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 AK2P54819 239 aa9.39□□□□□ -0.91
NEDD4-210ENST00000513957 SSRP1Q08945 709 aaKnown RBP9.39□□□□□ -0.91
NEDD4-210ENST00000513957 HIC1Q14526 733 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms