RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 NLGN2Q8NFZ4 835 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 SORCS2Q96PQ0 1159 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 ARID3AQ99856 593 aa5.34□□□□□ -1.55
PDLIM5-218ENST00000513341 LRRC37A3O60309 1634 aa5.34□□□□□ -1.56
PDLIM5-218ENST00000513341 GOLGB1Q14789 3259 aaKnown RBP5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 CCDC7Q96M83 1385 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 SHISA3A0PJX4 238 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 MATN3O15232 486 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 LRRN2O75325 713 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 USP2O75604 605 aaPredicted RBP5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 IGFBP6P24592 240 aaPredicted RBP5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 RPL6Q02878 288 aaKnown RBP5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 LAPTM5Q13571 262 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 TSNAXIP1Q2TAA8 658 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 UBXN11Q5T124 520 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 CEP128Q6ZU80 1094 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 USHBP1Q8N6Y0 703 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 KCNH5Q8NCM2 988 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 HHIPL1Q96JK4 782 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 CDK19Q9BWU1 502 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 C1QTNF3Q9BXJ4 246 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 TFCP2L1Q9NZI6 479 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 SPG7Q9UQ90 795 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 PAPPAQ13219 1627 aa5.33□□□□□ -1.56
PDLIM5-218ENST00000513341 PNPLA7Q6ZV29 1317 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 USP17L7P0C7H9 530 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 SEPT6Q14141 434 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 CLEC16AQ2KHT3 1053 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 DAGLBQ8NCG7 672 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 KREMEN1Q96MU8 473 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 FRMD6Q96NE9 622 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 MPHOSPH9Q99550 1183 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 ZMYM5Q9UJ78 669 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 PCDHB5Q9Y5E4 795 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 KAT6BQ8WYB5 2073 aa5.32□□□□□ -1.56
PDLIM5-218ENST00000513341 USP6P35125 1406 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 NHSQ6T4R5 1651 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 TOPAZ1Q8N9V7 1692 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 ADGRB1O14514 1584 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 TMEM82A0PJX8 343 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 SOWAHDA6NJG2 315 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 BUB1BO60566 1050 aaPredicted RBP5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 LMNB1P20700 586 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 RPL10P27635 214 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 ARL4AP40617 200 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 FMR1Q06787 632 aaKnown RBP eCLIP5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 FSTL1Q12841 308 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 GALNT18Q6P9A2 607 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 ARHGEF25Q86VW2 580 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 SLC16A11Q8NCK7 471 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 LINC00116Q8NCU8 138 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 ZNF526Q8TF50 670 aaPredicted RBP5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 HDAC8Q9BY41 377 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 TNFRSF10DQ9UBN6 386 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 COL18A1P39060 1754 aa5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 ARHGEF28Q8N1W1 1705 aaKnown RBP5.31□□□□□ -1.56
PDLIM5-218ENST00000513341 WNK3Q9BYP7 1800 aa5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 ITGB3P05106 788 aa5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 TMC6Q7Z403 805 aa5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 TTC9BQ8N6N2 239 aa5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 ZNF655Q8N720 491 aaPredicted RBP5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 FAM13CQ8NE31 585 aa5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 PLCD4Q9BRC7 762 aa5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 ASCC2Q9H1I8 757 aaPredicted RBP5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 MIR1-1HGQ9H1L0 117 aa5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 WWC3Q9ULE0 1092 aa5.3□□□□□ -1.56
PDLIM5-218ENST00000513341 WDR90Q96KV7 1748 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 WTIPA6NIX2 430 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 UPK3BL1B0FP48 263 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 UPK3BL2E5RIL1 263 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 IL2RBP14784 551 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 RTP1P59025 263 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 VWA3BQ502W6 1294 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 CPZQ66K79 652 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 LIPIQ6XZB0 460 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 CCDC84Q86UT8 332 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 COL23A1Q86Y22 540 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 RBM15Q96T37 977 aaKnown RBP eCLIP5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 TNFRSF12AQ9NP84 129 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 SMPD4Q9NXE4 827 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 TTF2Q9UNY4 1162 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 BTAF1O14981 1849 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 TNS2Q63HR2 1409 aa5.29□□□□□ -1.56
PDLIM5-218ENST00000513341 SLIT3O75094 1523 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 TRPM1Q7Z4N2 1603 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 ZBTB7CA1YPR0 619 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 SH3D21A4FU49 640 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 FADS2P1A8MWK0 482 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 PFKLP17858 780 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 ENDOUP21128 410 aaKnown RBP5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 SDHBP21912 280 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 PCBP3P57721 371 aaKnown RBP5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 NMIQ13287 307 aaPredicted RBP5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 HOMEZQ8IX15 550 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 C16orf71Q8IYS4 520 aaPredicted RBP5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 FCRL2Q96LA5 508 aaPredicted RBP5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 CCDC74BQ96LY2 380 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 TCFL5Q9UL49 500 aa5.28□□□□□ -1.56
PDLIM5-218ENST00000513341 PPIP5K1Q6PFW1 1433 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms