RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 ZSCAN25Q6NSZ9 544 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 BTNL9Q6UXG8 535 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 IFNL3Q8IZI9 196 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 DBF4BQ8NFT6 615 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
RNF4-218ENST00000513284 UPF3BQ9BZI7 483 aaKnown RBP13.27□□□□□ -0.29
RNF4-218ENST00000513284 PTPDC1A2A3K4 754 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 PATL2C9JE40 543 aaKnown RBP13.26□□□□□ -0.29
RNF4-218ENST00000513284 GPAA1O43292 621 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 MBTPS2O43462 519 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 RAB11FIP3O75154 756 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 MMP3P08254 477 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 RPS6P62753 249 aaKnown RBP13.26□□□□□ -0.29
RNF4-218ENST00000513284 ARHGAP1Q07960 439 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 PDE4DQ08499 809 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 EP400NLQ6ZTU2 488 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 CCDC155Q8N6L0 562 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 DCHS1Q96JQ0 3298 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 CRBNQ96SW2 442 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 CLDND1Q9NY35 253 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 GTF2IRD1Q9UHL9 959 aa13.26□□□□□ -0.29
RNF4-218ENST00000513284 RAD50Q92878 1312 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 EFCAB14O75071 495 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 LINC00271P0C7V0 271 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 PTPN5P54829 565 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 CLUL1Q15846 466 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 PTPROQ16827 1216 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 LY6KQ17RY6 165 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 TIGD5Q53EQ6 642 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 RNF207Q6ZRF8 634 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 TRIM67Q6ZTA4 783 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 RPAINQ86UA6 219 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 TMEM192Q8IY95 271 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 APPBP2Q92624 585 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 NSUN3Q9H649 340 aaKnown RBP13.25□□□□□ -0.29
RNF4-218ENST00000513284 ZNF287Q9HBT7 754 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 FAM50BQ9Y247 325 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 MYO15AQ9UKN7 3530 aa13.25□□□□□ -0.29
RNF4-218ENST00000513284 TMEM221A6NGB7 291 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 M0R296 226 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 HAS3O00219 553 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 RNF113AO15541 343 aaKnown RBP13.24□□□□□ -0.29
RNF4-218ENST00000513284 APPP05067 770 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 GTF2F1P35269 517 aaKnown RBP eCLIP13.24□□□□□ -0.299e-9■■■■■ 35.7
RNF4-218ENST00000513284 TDO2P48775 406 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 HYAL1Q12794 435 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 PTK7Q13308 1070 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 MYOCDQ8IZQ8 938 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 KBTBD3Q8NAB2 608 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 TBC1D5Q92609 795 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 TOP1MTQ969P6 601 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 SAMD11Q96NU1 681 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 SEC62Q99442 399 aaKnown RBP13.24□□□□□ -0.29
RNF4-218ENST00000513284 FAM86C1Q9NVL1 165 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 STX8Q9UNK0 236 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 MTMR7Q9Y216 660 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.24□□□□□ -0.29
RNF4-218ENST00000513284 SPTBN4Q9H254 2564 aa13.24□□□□□ -0.29
RNF4-218ENST00000513284 FOXP2O15409 715 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 SMARCA5O60264 1052 aaPredicted RBP13.23□□□□□ -0.29
RNF4-218ENST00000513284 GFRA3O60609 400 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 PSEN2P49810 448 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 HNRNPUQ00839 825 aaKnown RBP eCLIP13.23□□□□□ -0.29
RNF4-218ENST00000513284 PDE4BQ07343 736 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 PLEKHG4Q58EX7 1191 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 SYDE2Q5VT97 1194 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 FBXO11Q86XK2 927 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 MIER1Q8N108 512 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 DNERQ8NFT8 737 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 ALG1Q9BT22 464 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 MICAL3Q7RTP6 2002 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 ATG2AQ2TAZ0 1938 aa13.23□□□□□ -0.29
RNF4-218ENST00000513284 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.22□□□□□ -0.29
RNF4-218ENST00000513284 LINC01565O15544 149 aa13.22□□□□□ -0.29
RNF4-218ENST00000513284 TBX10O75333 385 aa13.22□□□□□ -0.29
RNF4-218ENST00000513284 AMHP03971 560 aa13.22□□□□□ -0.29
RNF4-218ENST00000513284 GNAT2P19087 354 aa13.22□□□□□ -0.29
RNF4-218ENST00000513284 CASTP20810 708 aaKnown RBP13.22□□□□□ -0.29
RNF4-218ENST00000513284 PPARAQ07869 468 aa13.22□□□□□ -0.29
RNF4-218ENST00000513284 CHST3Q7LGC8 479 aa13.22□□□□□ -0.29
RNF4-218ENST00000513284 C7orf31Q8N865 590 aa13.22□□□□□ -0.29
RNF4-218ENST00000513284 GPCPD1Q9NPB8 672 aa13.22□□□□□ -0.29
RNF4-218ENST00000513284 ZDBF2Q9HCK1 2354 aa13.22□□□□□ -0.29
RNF4-218ENST00000513284 COL4A6Q14031 1691 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 VPS13AQ96RL7 3174 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 STXBP3O00186 592 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 GRM6O15303 877 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 UPP2O95045 317 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 GH1P01241 217 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 MS4A1P11836 297 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 VCPP55072 806 aaKnown RBP13.21□□□□□ -0.29
RNF4-218ENST00000513284 ZXDAP98168 799 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 FOXK2Q01167 660 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 CTDSPL2Q05D32 466 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 CAMK1Q14012 370 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 DIEXFQ68CQ4 756 aaKnown RBP13.21□□□□□ -0.29
RNF4-218ENST00000513284 SEPT14Q6ZU15 432 aa13.21□□□□□ -0.29
RNF4-218ENST00000513284 DCAF4Q8WV16 495 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms