RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 KRT40Q6A162 431 aa22.39■■□□□ 1.17
SMAD1-211ENST00000512019 MCTP2Q6DN12 878 aa22.39■■□□□ 1.17
SMAD1-211ENST00000512019 SLC39A5Q6ZMH5 540 aa22.39■■□□□ 1.17
SMAD1-211ENST00000512019 REXO1Q8N1G1 1221 aaKnown RBP22.39■■□□□ 1.17
SMAD1-211ENST00000512019 SPRYD3Q8NCJ5 442 aa22.39■■□□□ 1.17
SMAD1-211ENST00000512019 FBXO18Q8NFZ0 1043 aa22.39■■□□□ 1.17
SMAD1-211ENST00000512019 SYTL5Q8TDW5 730 aaPredicted RBP22.39■■□□□ 1.17
SMAD1-211ENST00000512019 DNAJC25-GNG10A0A024R161 153 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 KBTBD13C9JR72 458 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 H3BQV1 296 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 MEIS2O14770 477 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 MMP1P03956 469 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 HOXA13P31271 388 aaPredicted RBP22.38■■□□□ 1.17
SMAD1-211ENST00000512019 LRRC41Q15345 812 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 USP17L6PQ6QN14 398 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 BLIDQ8IZY5 108 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 TBC1D5Q92609 795 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 FERMT2Q96AC1 680 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 LBHD1Q9BQE6 289 aaPredicted RBP22.38■■□□□ 1.17
SMAD1-211ENST00000512019 GJB4Q9NTQ9 266 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 MTMR10Q9NXD2 777 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 MCM3APO60318 1980 aa22.38■■□□□ 1.17
SMAD1-211ENST00000512019 SPDYE3A6NKU9 549 aa22.37■■□□□ 1.17
SMAD1-211ENST00000512019 KRT2P35908 639 aa22.37■■□□□ 1.17
SMAD1-211ENST00000512019 ADCYAP1R1P41586 468 aa22.37■■□□□ 1.17
SMAD1-211ENST00000512019 AP3B2Q13367 1082 aa22.37■■□□□ 1.17
SMAD1-211ENST00000512019 UBE2SQ16763 222 aa22.37■■□□□ 1.17
SMAD1-211ENST00000512019 ZNF792Q3KQV3 632 aa22.37■■□□□ 1.17
SMAD1-211ENST00000512019 EHMT1Q9H9B1 1298 aa22.37■■□□□ 1.17
SMAD1-211ENST00000512019 ADD3Q9UEY8 706 aaKnown RBP22.37■■□□□ 1.17
SMAD1-211ENST00000512019 FOSP01100 380 aaPredicted RBP22.36■■□□□ 1.17
SMAD1-211ENST00000512019 GUCY1B3Q02153 619 aa22.36■■□□□ 1.17
SMAD1-211ENST00000512019 TRIM60Q495X7 471 aa22.36■■□□□ 1.17
SMAD1-211ENST00000512019 FAM133AQ8N9E0 248 aa22.36■■□□□ 1.17
SMAD1-211ENST00000512019 DNERQ8NFT8 737 aa22.36■■□□□ 1.17
SMAD1-211ENST00000512019 TINF2Q9BSI4 451 aa22.36■■□□□ 1.17
SMAD1-211ENST00000512019 DIS3Q9Y2L1 958 aaKnown RBP22.36■■□□□ 1.17
SMAD1-211ENST00000512019 PDIA4P13667 645 aaKnown RBP22.35■■□□□ 1.17
SMAD1-211ENST00000512019 CLK2P49760 499 aaKnown RBP22.35■■□□□ 1.17
SMAD1-211ENST00000512019 SNX17Q15036 470 aa22.35■■□□□ 1.17
SMAD1-211ENST00000512019 NPY5RQ15761 445 aa22.35■■□□□ 1.17
SMAD1-211ENST00000512019 FCHSD1Q86WN1 690 aa22.35■■□□□ 1.17
SMAD1-211ENST00000512019 MPHOSPH6Q99547 160 aaKnown RBP22.35■■□□□ 1.17
SMAD1-211ENST00000512019 PRDM5Q9NQX1 630 aaPredicted RBP22.35■■□□□ 1.17
SMAD1-211ENST00000512019 COL20A1Q9P218 1284 aa22.35■■□□□ 1.17
SMAD1-211ENST00000512019 PRKAG2Q9UGJ0 569 aa22.35■■□□□ 1.17
SMAD1-211ENST00000512019 CNTN2Q02246 1040 aa22.34■■□□□ 1.17
SMAD1-211ENST00000512019 GNL2Q13823 731 aaKnown RBP22.34■■□□□ 1.17
SMAD1-211ENST00000512019 SH3RF1Q7Z6J0 888 aa22.34■■□□□ 1.17
SMAD1-211ENST00000512019 DIS3L2Q8IYB7 885 aaKnown RBP22.34■■□□□ 1.17
SMAD1-211ENST00000512019 NSUN6Q8TEA1 469 aaKnown RBP22.34■■□□□ 1.17
SMAD1-211ENST00000512019 LENG1Q96BZ8 264 aaPredicted RBP22.34■■□□□ 1.17
SMAD1-211ENST00000512019 RMDN3Q96TC7 470 aa22.34■■□□□ 1.17
SMAD1-211ENST00000512019 LOC102724159A0A0B4J2E5 919 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 VPS37CA5D8V6 355 aaPredicted RBP22.33■■□□□ 1.17
SMAD1-211ENST00000512019 B4DLN1 442 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 PGK1P00558 417 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 ZNF865P0CJ78 1059 aaPredicted RBP22.33■■□□□ 1.17
SMAD1-211ENST00000512019 SYT1P21579 422 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 PWP2Q15269 919 aaKnown RBP22.33■■□□□ 1.17
SMAD1-211ENST00000512019 ARHGEF16Q5VV41 709 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 JAKMIP3Q5VZ66 844 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 KRT25Q7Z3Z0 450 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 ZNF467Q7Z7K2 595 aaPredicted RBP22.33■■□□□ 1.17
SMAD1-211ENST00000512019 TAAR1Q96RJ0 339 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 ANO3Q9BYT9 981 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 XPNPEP3Q9NQH7 507 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 PDLIM7Q9NR12 457 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 PCDHA6Q9UN73 950 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 STXBP5LQ9Y2K9 1186 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 PCDHA8Q9Y5H6 950 aa22.33■■□□□ 1.17
SMAD1-211ENST00000512019 LCTP09848 1927 aa22.33■■□□□ 1.16
SMAD1-211ENST00000512019 LAMA2P24043 3122 aaKnown RBP22.33■■□□□ 1.16
SMAD1-211ENST00000512019 SOWAHBA6NEL2 793 aa22.32■■□□□ 1.16
SMAD1-211ENST00000512019 M0R2N6 131 aa22.32■■□□□ 1.16
SMAD1-211ENST00000512019 DLL1O00548 723 aa22.32■■□□□ 1.16
SMAD1-211ENST00000512019 ALDH5A1P51649 535 aaPredicted RBP22.32■■□□□ 1.16
SMAD1-211ENST00000512019 MSL3Q8N5Y2 521 aaKnown RBP22.32■■□□□ 1.16
SMAD1-211ENST00000512019 RASGRP4Q8TDF6 673 aa22.32■■□□□ 1.16
SMAD1-211ENST00000512019 FOXP1Q9H334 677 aaPredicted RBP22.32■■□□□ 1.16
SMAD1-211ENST00000512019 PXMP2Q9NR77 195 aa22.32■■□□□ 1.16
SMAD1-211ENST00000512019 TMEM260Q9NX78 707 aa22.32■■□□□ 1.16
SMAD1-211ENST00000512019 NRBP1Q9UHY1 535 aa22.32■■□□□ 1.16
SMAD1-211ENST00000512019 PHF24Q9UPV7 400 aa22.32■■□□□ 1.16
SMAD1-211ENST00000512019 FRMPD4Q14CM0 1322 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 CCDC194A0A1B0GVG4 234 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 TRIM43BA6NCK2 446 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 ASB14A6NK59 587 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 STX6O43752 255 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 RARBP10826 455 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 SHHQ15465 462 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 C9orf50Q5SZB4 431 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 MCTP1Q6DN14 999 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 OXER1Q8TDS5 423 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 BADQ92934 168 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 TRIM43Q96BQ3 446 aaPredicted RBP22.31■■□□□ 1.16
SMAD1-211ENST00000512019 PURBQ96QR8 312 aaKnown RBP22.31■■□□□ 1.16
SMAD1-211ENST00000512019 IWS1Q96ST2 819 aa22.31■■□□□ 1.16
SMAD1-211ENST00000512019 BTBD18B2RXH4 712 aa22.3■■□□□ 1.16
SMAD1-211ENST00000512019 ADAMTS3O15072 1205 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms