RNA–Protein interactions for RNA: ENST00000511125.1

SMAD1-209, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 3,293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-209ENST00000511125 SOWAHBA6NEL2 793 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 COBLO75128 1261 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 OR52Z1P0C646 297 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 PFKFB1P16118 471 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 CAP1Q01518 475 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 CCDC73Q6ZRK6 1079 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 FBXO16Q8IX29 292 aaPredicted RBP9.12□□□□□ -0.95
SMAD1-209ENST00000511125 SDF4Q9BRK5 362 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 PDCD2LQ9BRP1 358 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 ZFYVE28Q9HCC9 887 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 PDGFCQ9NRA1 345 aa9.12□□□□□ -0.95
SMAD1-209ENST00000511125 A0A087X0B3 334 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 MSH4O15457 936 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 YEATS4O95619 227 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 PDIA4P13667 645 aaKnown RBP9.11□□□□□ -0.95
SMAD1-209ENST00000511125 HSD17B4P51659 736 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 CCL14Q16627 93 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 GPR142Q7Z601 462 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 MB21D1Q8N884 522 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 HAS1Q92839 578 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 PCDHA12Q9UN75 941 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 CEP131Q9UPN4 1083 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 TULP1O00294 542 aaPredicted RBP9.11□□□□□ -0.95
SMAD1-209ENST00000511125 CTGFP29279 349 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 SREBF1P36956 1147 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 SREBF2Q12772 1141 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 NOGQ13253 232 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 CEP55Q53EZ4 464 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 C4orf32Q8N8J7 132 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 ZNF577Q9BSK1 485 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 RGL1Q9NZL6 768 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 TNPO2O14787 897 aaKnown RBP9.11□□□□□ -0.95
SMAD1-209ENST00000511125 ZBTB39O15060 712 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 TLR2O60603 784 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 FOSP01100 380 aaPredicted RBP9.11□□□□□ -0.95
SMAD1-209ENST00000511125 IRX5P78411 483 aaPredicted RBP9.11□□□□□ -0.95
SMAD1-209ENST00000511125 ATP2C1P98194 919 aaPredicted RBP9.11□□□□□ -0.95
SMAD1-209ENST00000511125 PDE4DQ08499 809 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 TRAF1Q13077 416 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 AP3B2Q13367 1082 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 CSPP1Q1MSJ5 1256 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 JMYQ8N9B5 988 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 NSUN6Q8TEA1 469 aaKnown RBP9.11□□□□□ -0.95
SMAD1-209ENST00000511125 MRPS27Q92552 414 aaKnown RBP9.11□□□□□ -0.95
SMAD1-209ENST00000511125 COPS5Q92905 334 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 LENG1Q96BZ8 264 aaPredicted RBP9.11□□□□□ -0.95
SMAD1-209ENST00000511125 KCNH7Q9NS40 1196 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 LRWD1Q9UFC0 647 aa9.11□□□□□ -0.95
SMAD1-209ENST00000511125 PTPREP23469 700 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 CYP2C19P33261 490 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 UBA7P41226 1012 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 PSMC4P43686 418 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 CCNA1P78396 465 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 MTMR1Q13613 665 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 LY6KQ17RY6 165 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 LONRF3Q496Y0 759 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 ADALQ6DHV7 355 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 CHST13Q8NET6 341 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 BLZF1Q9H2G9 400 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 SERTAD1Q9UHV2 236 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 KCNH3Q9ULD8 1083 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 TRPM7Q96QT4 1865 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 TMEM150BA6NC51 233 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 PIK3CDO00329 1044 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 ZNF202O95125 648 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 FDX1P10109 184 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 SYKP43405 635 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 CTTNQ14247 550 aaKnown RBP9.1□□□□□ -0.95
SMAD1-209ENST00000511125 MAEAQ7L5Y9 396 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 ZHX1Q9UKY1 873 aaPredicted RBP9.1□□□□□ -0.95
SMAD1-209ENST00000511125 SRPRBQ9Y5M8 271 aaKnown RBP9.1□□□□□ -0.95
SMAD1-209ENST00000511125 MYH7BA7E2Y1 1941 aa9.1□□□□□ -0.95
SMAD1-209ENST00000511125 RLFQ13129 1914 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 IPO5O00410 1097 aaKnown RBP9.09□□□□□ -0.95
SMAD1-209ENST00000511125 EML1O00423 815 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 ALDH5A1P51649 535 aaPredicted RBP9.09□□□□□ -0.95
SMAD1-209ENST00000511125 OAZ1P54368 228 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 CACNB1Q02641 598 aaPredicted RBP9.09□□□□□ -0.95
SMAD1-209ENST00000511125 TKFCQ3LXA3 575 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 LRCH2Q5VUJ6 765 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 CLEC17AQ6ZS10 378 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 CYFIP1Q7L576 1253 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 NPLOC4Q8TAT6 608 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 LENG9Q96B70 501 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 GLT8D2Q9H1C3 349 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 TCEAL9Q9UHQ7 104 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 GABRQQ9UN88 632 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 GAS7O60861 476 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 KINO60870 393 aaKnown RBP9.09□□□□□ -0.95
SMAD1-209ENST00000511125 RGS20O76081 388 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 SLC25A27O95847 323 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 GCLCP48506 637 aaPredicted RBP9.09□□□□□ -0.95
SMAD1-209ENST00000511125 TRAPPC10P48553 1259 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 PLEKHH3Q7Z736 793 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 TPH2Q8IWU9 490 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 RNF214Q8ND24 703 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 BANK1Q8NDB2 785 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 SNX29Q8TEQ0 813 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 MXRA8Q9BRK3 442 aa9.09□□□□□ -0.95
SMAD1-209ENST00000511125 RNF186Q9NXI6 227 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms